Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01474 ATGGCTTCTTATTTTCAGTGTTTCTGGGGTCTATTTCTCTCATGTTCTCTTTATTTTGTTCAATCAACATCAACTCCTCAAGTCTATATAGTCTATTTGGGGCTCAACCATATTCGTGATCCTGGCCTCACTTATGATTACCATCTTCAACTTCTATCTACTGTCTTTACATGTGAAAAAGATGCAGAACGTTCAATTCTCTATAGCTACAAGCATAGTTTCTCAGGGTTTTCAGCAATGCTCAATGCAAGCCAAGCAGCCACACTAGCCAATATGCAAGAAGTGGTGTCAGTTTTCAGAAGCAAGTCATCAAGGCCACACACAACAAGAAGCTGGGATTTCTTGGACCTTACCTTGGACAATGGTGAAGTGACTCCAATGCAGCTAATTTATGGTGAAGACATCATTGTTGGGGTATTAGACACAGGTGTATGGCCAGAATCTGAAAGTTTCCAGGAAGATCCTAGCATTGGTCCTATTCCATCAACTTGGAAAGGAGAATGTGTTGAGGGAGAGAGATTCAACCCTACAACAGCATGCAACAACAAGTTAATTGGTGCTCGTTACTACCTGAAAGGTTTTGAACAAGAATATGGACCACTAAATACAACAGAGAATTTTGAGTACCAATCACCTCGAGATTTTGTTGGCCATGGAACACACACAGCTTCAACAGCAGTAGGGTCCATAGTGGAAGATGCAAGTTTCTTTGACATAGGAAAAGGCACTGCCAGGGGTGGTGCTCCAAGGGCTCGTTTGGCTGTTTATAAAGTATGCTGGAACGTGGAATATTATGGAAGGTGTTCAGAAGCAGATATAATGGCAGCTTTTGATGATGCTTTGCATGATGGGGTTCACATTATCTCAGCTTCCTTTGGTCCAATTCCACCACTTGCTCCTTTCTTCAAAGACAGTTCCAGCATTGGTTCGTTCCATGCCATGCAAATGGGTGTAACAGTGGTGTTCTCTGCAGGAAACTATGATGAGTCACCTGAACCATCTCTAGTTGGAAATGTTGAACCATGGTCCATCTGCGTGGCTGCTTCTTCAATTGATCGAACCTTCCCCACAAAAGTAATCATTGGTGACAATAATCTTTTCATGGGAGAAAGCTTGATTACCACACAGATAAATGCAAAATTGGCTGATGCAAGGAGATATTTTTACAATGGGATATGTGAGATGGACTATATTATTAAGCCATCAAAACCAGGAGAAGGGAAGATTGTGCTATGCTTCTCTACAATTGGACCAAAATCAAGTCTGGAAGCAGCAAAAGCAGTGAAGGAAGTGAATGCAACAGGATTGATCTTTGTTGAACCTATGACAAGGCAATTACCTGATGTTAGTGTTGTTCCCATAGTACTTGTCAATTTGGAAGAAGGGACTAAAATTAAGCATTTTCTTGCTGAATATCCCAGGTATAATCATTGCCATGAGATGGAAGTACTTATTTTGTTTTTCTTTCTTCATTATCCTGTTGGATAA 1488 0.4086 MASYFQCFWGLFLSCSLYFVQSTSTPQVYIVYLGLNHIRDPGLTYDYHLQLLSTVFTCEKDAERSILYSYKHSFSGFSAMLNASQAATLANMQEVVSVFRSKSSRPHTTRSWDFLDLTLDNGEVTPMQLIYGEDIIVGVLDTGVWPESESFQEDPSIGPIPSTWKGECVEGERFNPTTACNNKLIGARYYLKGFEQEYGPLNTTENFEYQSPRDFVGHGTHTASTAVGSIVEDASFFDIGKGTARGGAPRARLAVYKVCWNVEYYGRCSEADIMAAFDDALHDGVHIISASFGPIPPLAPFFKDSSSIGSFHAMQMGVTVVFSAGNYDESPEPSLVGNVEPWSICVAASSIDRTFPTKVIIGDNNLFMGESLITTQINAKLADARRYFYNGICEMDYIIKPSKPGEGKIVLCFSTIGPKSSLEAAKAVKEVNATGLIFVEPMTRQLPDVSVVPIVLVNLEEGTKIKHFLAEYPRYNHCHEMEVLILFFFLHYPVG. 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01474 495 ProSiteProfiles Serine proteases, subtilase domain profile. 111 495 - -
Seca6g01474 495 SUPERFAMILY Subtilisin-like 107 374 IPR036852 GO:0004252|GO:0006508
Seca6g01474 495 CDD PA_subtilisin_like 359 471 - -
Seca6g01474 495 FunFam Subtilisin-like protease SBT5.3 19 107 - -
Seca6g01474 495 Gene3D - 352 471 - -
Seca6g01474 495 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 471 IPR045051 -
Seca6g01474 495 CDD Peptidases_S8_3 106 351 IPR034197 -
Seca6g01474 495 Pfam Peptidase inhibitor I9 28 104 IPR010259 -
Seca6g01474 495 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
Seca6g01474 495 Pfam Subtilase family 132 420 IPR000209 GO:0006508|GO:0008236
Seca6g01474 495 Gene3D Peptidase S8/S53 domain 134 351 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01474 Seca-Chr6 64552785 64556571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01474 58 473 Subtilisin-like Serine Gene Family AT4G26330 55.344 1.07e-159 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01474 - - cave:132164481 654.055