Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01448 ATGCTAGCACCTTGGCATTGTCTAAGTGCTCGTGTTTTGGTTAATGGCAATCCCTCATTTGAAAAGGTTTACGGTGAAGATCTATGGCAGTATACTGCGGAAAATCTTGATCATAGCAAGCTGTTCAATGAGGCTATGGCATGTGATACTAAGTTTGTTGTGCCTGCTATTATTGAAGGTTGTAGTGAAGCATTTGATGGTGTTAACACCTTGGTGGATGTGGGTGGAGGGAATGGCACCACCTCTCGCATCCTTGCTAAGGCTTGCCCTTGGATTCAATTGATCAATTTTGATCTTCCTCATGTCATTAATGCAGCCCCAAAGTGCAATGGAGTGGAACATGTAGCTGGTGACATGTTTCAAAGTGTCCCCAAAGCTGATGCTGCATTTATTAAGTGGGTTTTGCATGACTGGAGTGATGAAGAGTGCATCCAAATCTTAAAGAAGTGCAAAGAAGCTATTCCAAAGGAAAATGGAAGGGTTATTATTGTGGAAGCGGTGATTGAAGAAGGAGGAGGAAAACATGACAAGTTAAAAGATATAGGATTACTACTGGATATGGTGATGATGGCACACACTAATTTAGGCAAAGAAAGGACACTGAAAGAGTGGGACTATGTGATTAAAATGGCAGGATTTAGTGCATACACTGTGAAAGCTATCAATGCTGTGCAGTCTGTAATTTTGGCTTTCTCTTGA 699 0.4149 MLAPWHCLSARVLVNGNPSFEKVYGEDLWQYTAENLDHSKLFNEAMACDTKFVVPAIIEGCSEAFDGVNTLVDVGGGNGTTSRILAKACPWIQLINFDLPHVINAAPKCNGVEHVAGDMFQSVPKADAAFIKWVLHDWSDEECIQILKKCKEAIPKENGRVIIVEAVIEEGGGKHDKLKDIGLLLDMVMMAHTNLGKERTLKEWDYVIKMAGFSAYTVKAINAVQSVILAFS. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01448 232 CDD AdoMet_MTases 70 164 - -
Seca6g01448 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 229 IPR029063 -
Seca6g01448 232 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 232 IPR016461 GO:0008168
Seca6g01448 232 Gene3D Vaccinia Virus protein VP39 1 231 IPR029063 -
Seca6g01448 232 PANTHER O-METHYLTRANSFERASE 10 215 IPR016461 GO:0008168
Seca6g01448 232 FunFam O-methyltransferase family protein 1 231 - -
Seca6g01448 232 Pfam O-methyltransferase domain 5 214 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01448 Seca-Chr6 63913629 63916369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01448 1 218 Monolignol Biosynthesis Gene Families AT5G54160 41.284 5.92e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01448 K22588 - gmx:100782951 358.992