Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01437 ATGGATAATACAAATGATGTTTCAGTTGTTAAGTTGGATGATGAGAATGACCCTAGTTATGATGTTGGTCATGATGAAAGTATTAATGCAGATTCCTCAGATAATAGAGAACAGAGTCGACCTGCAGATATGGATGTTGGAGATGGGCAATATAAGAGGATAACAAATCTGACCAGTGATGATATAAGGGGTTTGGAGTTTGTAACTCAGCATGTTGCTTTCAAGTTTTACGAGGAATATGCTAAAGCCCATGGTTTTGTAGTAAGGAAAGATGATATAAGGAAGGATTTTAGGGGTAACACTGTAATGCGACAATTTGTATGCAATAGACAAGGATTGAGAAACAAAAAGCATTTCATGAGGGTAGACAGGAAAAGTGAGCACAGAGCAATTACCCGAACAAATTGTGCAGCTAAGCTTCGGGTACGTTTCAATCGCAAGAAATCAAAATGGATAGTGGTGTCTTTTGAGGAGGCACATAATCATGAGCTAACCCCTTCAGTATATGTGCATTTATATCATACTTATCATAAAATGAGTGATGCAGATAAAGGTTAG 558 0.3746 MDNTNDVSVVKLDDENDPSYDVGHDESINADSSDNREQSRPADMDVGDGQYKRITNLTSDDIRGLEFVTQHVAFKFYEEYAKAHGFVVRKDDIRKDFRGNTVMRQFVCNRQGLRNKKHFMRVDRKSEHRAITRTNCAAKLRVRFNRKKSKWIVVSFEEAHNHELTPSVYVHLYHTYHKMSDADKG. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01437 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 167 - -
Seca6g01437 185 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Seca6g01437 185 MobiDBLite consensus disorder prediction 1 49 - -
Seca6g01437 185 MobiDBLite consensus disorder prediction 7 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01437 Seca-Chr6 63688601 63689158 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01437 FAR1 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01437 - - ccaj:109792835 215.312