Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01432 ATGGGAGAAAATACTTTGTCAGGAAAAAAGTCGTACACTGTCAGAAAGGAAAGAAAGAAACAAAAGTTATCAGAATGCGTCAGAAGGCAAGTTTTTGCACTGAAATTGAAAGACCACTTTGCCTCAGAAGAAGGCCATACAGTGGTAGCATGGAATAGGAAAAAGGAGATAAGTTGCAGAGGAGCATGGGAGACAGCAACACAACGCAGCAGACAACAAAGCATAATGCGTTCAAGATTATCAAATAAAGAAAAGAAAGTAAGAATAAAAAGAAAAAGAAACATCGTTGCTCCAAAGTCTGCTGCAGCTACTGAATCATTGGGTGGTCTAACTGTCCAGCTCCAGTTGCTCCACTCCTCCCTGAAAGTGAGGCATGTCCCCAGGACTACAGTGCATAACTTTTCTGATTTTGGGTTAGTGAAAGATGCCCCAGTGGGTGAATTGACTCATGTTTCAACTAGATTGATGGGTACTCAAGGGCATGTAGCGCCTGAGTATGTGATGACAAGGCACTTGAGTTGGAAGAGTGATGTTAATAGTTTTGGGGAGTTATTGCTTGAGATAATGATTGGGAGAAGGGCAGCAGATTGGAAGAGGCCTGTAGCCAAGCATAACCTGTTTGAACGGGCAAGGCCTCTGTAG 642 0.4315 MGENTLSGKKSYTVRKERKKQKLSECVRRQVFALKLKDHFASEEGHTVVAWNRKKEISCRGAWETATQRSRQQSIMRSRLSNKEKKVRIKRKRNIVAPKSAAATESLGGLTVQLQLLHSSLKVRHVPRTTVHNFSDFGLVKDAPVGELTHVSTRLMGTQGHVAPEYVMTRHLSWKSDVNSFGELLLEIMIGRRAADWKRPVAKHNLFERARPL. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01432 213 Gene3D Transferase(Phosphotransferase) domain 1 80 213 - -
Seca6g01432 213 PANTHER OS01G0588500 PROTEIN-RELATED 134 212 - -
Seca6g01432 213 Pfam Protein tyrosine and serine/threonine kinase 116 191 IPR001245 GO:0004672|GO:0006468
Seca6g01432 213 SUPERFAMILY Protein kinase-like (PK-like) 134 201 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01432 Seca-Chr6 63243186 63245434 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01432 134 213 Glycoside Hydrolase AT3G07070 53.750 4.19e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca6g01432 PK_Tyr_Ser-Thr 3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01432 - - osa:4346848 108.997