Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01429 ATGTTATTGGATTCGGACTACAATGTGAAACTTTCTGATTTTGGGTTGGTGAAAGATGCCCCTGTGGGTGAATTGACACATGTTTCAACTAGAGTGATGGGTAGTCAAGGGTATGCAGCCCCTGAGTATGTGATGACAAGGCACTTAAGTTGGAAGAGTGAGGTTTCTAGTTTTGGGGACGTATTGCTTGAGATAATGACAGGGAGAAGGGAAACGGATAGGAAGAGGTCTGTAGCGAAGCATAAGCTTTTTGAATGGGCAAGGCCTCAAATAAAGCTTGGAGGAGGAGCACAATTCTACTAA 303 0.4389 MLLDSDYNVKLSDFGLVKDAPVGELTHVSTRVMGSQGYAAPEYVMTRHLSWKSEVSSFGDVLLEIMTGRRETDRKRSVAKHKLFEWARPQIKLGGGAQFY. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01429 100 PANTHER OS01G0588500 PROTEIN-RELATED 2 90 - -
Seca6g01429 100 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
Seca6g01429 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01429 100 Pfam Protein tyrosine and serine/threonine kinase 2 72 IPR001245 GO:0004672|GO:0006468
Seca6g01429 100 Gene3D Transferase(Phosphotransferase) domain 1 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01429 Seca-Chr6 63220332 63220718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01429 1 92 Glycoside Hydrolase AT3G07070 55.435 3.22e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca6g01429 PK_Tyr_Ser-Thr 5.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01429 - - egu:105047713 134.035