Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01428 ATGCCAACCCCTGAGTATGTGAAGACTGGGAACTTGAGATGGAAGTGTGATGTGTATAGCTTTGGGGTCGTATTCCTTGAGATAATTACAAGGATTAGGGAAATGGATATGATGAGGCCTGTAGTGGAGTATAAGCTCGTGGAATGGCCAAGGCCTCAAATAAAGCATGGAGGAGGAGCAAATGCAAAACTTTCTAATTTACGGCTGGTGAAAGATTCCCCAGAGGGTGACTTGACTCTTGTGTCAACTAGAGAGACGGGAACTTATGGTTGTGCAACCCTTGAGTGTGTGATGGCAGGAAAAGAAGGACAAGGTGCCCCATCTTCCAACTCCAAATCACCCTCAGCTACTATCAACAAATATGGCCTGAGAATTGGGCCATCGTCGTGGAGCATGCCATGTCGCTGTCAAGCCTCTCCATTGAGCTTTACCCAACCTTTTCATCACCCCAAGCTAGTGCTGGTGGTGGTTGAGATGAGATTAGCATATATAGTAAGAGATGCATGTGATCTCATCTCAACTAGCACTAGTTTTGGATGA 540 0.4593 MPTPEYVKTGNLRWKCDVYSFGVVFLEIITRIREMDMMRPVVEYKLVEWPRPQIKHGGGANAKLSNLRLVKDSPEGDLTLVSTRETGTYGCATLECVMAGKEGQGAPSSNSKSPSATINKYGLRIGPSSWSMPCRCQASPLSFTQPFHHPKLVLVVVEMRLAYIVRDACDLISTSTSFG. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01428 179 SUPERFAMILY Protein kinase-like (PK-like) 4 56 IPR011009 -
Seca6g01428 179 PANTHER OS01G0588500 PROTEIN-RELATED 3 53 - -
Seca6g01428 179 Gene3D Transferase(Phosphotransferase) domain 1 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01428 Seca-Chr6 63217907 63219998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01428 4 56 Trihelix Transcription Factor Family AT1G68690 50.943 1.28e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01428 - - apan:127257916 69.707