Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g01427 | ATGTTATTGGATTCGGACTACAGTGTGAAACTTTCTGATTTTCGGTTGGTGAAAGATGCCCCTGTGGGTGAATTGACACATATTTCAACTAGAGTGATGGGTATTCAAGGGTATGCAGCCCCTGAGTATGTGATGACAAGGCACTTGAGTTGGAAGAGTGAAGTTTCTAGTTTTGGGGAGGTATTGCTTGAGATAATGACAGGGAAAAGGGCAACGGATAGGAAGAGGCCTGTAGCGAAGCATAACCTTTTTTAA | 255 | 0.4314 | MLLDSDYSVKLSDFRLVKDAPVGELTHISTRVMGIQGYAAPEYVMTRHLSWKSEVSSFGEVLLEIMTGKRATDRKRPVAKHNLF. | 85 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g01427 | 84 | ProSiteProfiles | Protein kinase domain profile. | 1 | 84 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca6g01427 | 84 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 71 | IPR001245 | GO:0004672|GO:0006468 | |
Seca6g01427 | 84 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 77 | IPR011009 | - | |
Seca6g01427 | 84 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 83 | - | - | |
Seca6g01427 | 84 | PANTHER | OS01G0588500 PROTEIN-RELATED | 2 | 83 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g01427 | Seca-Chr6 | 63217434 | 63217772 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g01427 | 1 | 83 | Glycoside Hydrolase | AT3G07070 | 54.217 | 5.05e-25 | 94.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca6g01427 | PK_Tyr_Ser-Thr | 6.1e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g01427 | - | - | egu:105047713 | 118.242 |