Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01426 ATGCATCTCGTACTATATATGTTGATCTCATCTCAACCAGAACCAGCACCAGCTTGGGGTGATGGAAAAGTCTCTGAGTATGTGATGACAGGGAACTTGAGTTGCAAAAGTGATTTGTATAGCTTTGGGGTGGTATTGCTTGAGATAATGACAGGGATGAGGGCAATGGATAGGAAAAATCCTGTAGCAGAGCATAACCTGGTGGAACGAGGCCTTGCTTTTCTGCACGAGGAAGCTAAAAAGCCATTGATTAATCGAGACTTCAAAACTTCTAATATGTTATTGGATTCGGACTACAGTGCAAAACTTTCTGATTTTGGGTTGGTGAAAGATGACCCAGTTGGTGAATTAACTCATGTTTCAACTAGAGAGATGGGTACTCAAGGGTATGCAGCCCCTGAGTATGTGATGACAAGGCACTTGAGTTGGAAGAGTGATGTTTATAGTTTTGGGGAGGTATTGCTTGAGGTAATGACAGGGAGAAGGGCAACGGATAGGAAGAGGTCTTTAGCGGAGCATAACCTGTTCTAA 531 0.4313 MHLVLYMLISSQPEPAPAWGDGKVSEYVMTGNLSCKSDLYSFGVVLLEIMTGMRAMDRKNPVAEHNLVERGLAFLHEEAKKPLINRDFKTSNMLLDSDYSAKLSDFGLVKDDPVGELTHVSTREMGTQGYAAPEYVMTRHLSWKSDVYSFGEVLLEVMTGRRATDRKRSLAEHNLF. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01426 176 SUPERFAMILY Protein kinase-like (PK-like) 70 167 IPR011009 -
Seca6g01426 176 Gene3D Transferase(Phosphotransferase) domain 1 15 67 - -
Seca6g01426 176 Gene3D Transferase(Phosphotransferase) domain 1 68 175 - -
Seca6g01426 176 SUPERFAMILY Protein kinase-like (PK-like) 26 71 IPR011009 -
Seca6g01426 176 Pfam Protein kinase domain 68 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01426 176 PANTHER OS01G0588500 PROTEIN-RELATED 26 69 - -
Seca6g01426 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01426 Seca-Chr6 63214183 63217017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01426 26 82 Glycoside Hydrolase AT3G07070 49.123 1.32e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca6g01426 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01426 - - egu:105047713 164.466