Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01424 ATGAAGAATTTTCAGGAGGTAGGATTGATTTTTTGCAACAAGTGCCAATGGGGGCAAAAACTAATATATGGATTTGTTTATGAGCTCAAACTAATAAATATCTTAATATATAAACTAATAAATATTTTGATTGGTTCTACAAAGGGCCTTGGTTTTCTGCATGAGGAAGCTAAAAAACCATTGATTTATCGAGACTTCAAAACTTCTAATATCTTATTGGATTCGGACTACAGTGTGAAAGTTTCTGATTTTGAGCTGGTGAAAGATGCTCTAGTGGGTGGCTTGACTCTTGTGTCAACTAGAGTGGCTAGAAGTCAAGGATTGCCGGCCCCTGAGTATGTAATAACAGGGCACTTGAGATGGAAGTGTGATGTGTATAGCTTTGGGGTGGTATTGCTTGATATAATGTCAGGGATTAGGGAAATGGATAGGAAGAGGCCTGTAGCGGAGCATAACCTGATGGAATGGGCAAGGCCTCAAATGAAGCTTGGAGGAGGAGCAAAATTCCACCAATTGATAGATCAAAAACTTGAAGGTCACAACTTAACTATATGA 555 0.3874 MKNFQEVGLIFCNKCQWGQKLIYGFVYELKLINILIYKLINILIGSTKGLGFLHEEAKKPLIYRDFKTSNILLDSDYSVKVSDFELVKDALVGGLTLVSTRVARSQGLPAPEYVITGHLRWKCDVYSFGVVLLDIMSGIREMDRKRPVAEHNLMEWARPQMKLGGGAKFHQLIDQKLEGHNLTI. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01424 184 Gene3D Transferase(Phosphotransferase) domain 1 32 183 - -
Seca6g01424 184 PANTHER OS01G0588500 PROTEIN-RELATED 39 180 - -
Seca6g01424 184 Pfam Protein kinase domain 41 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01424 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01424 184 SUPERFAMILY Protein kinase-like (PK-like) 38 156 IPR011009 -
Seca6g01424 184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 61 73 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01424 Seca-Chr6 63196360 63198476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01424 40 179 Glycoside Hydrolase AT3G07070 48.571 1.62e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca6g01424 Pkinase 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01424 - - cann:107878268 177.948