Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01415 ATGAGTTTAAATGCAAGTGAATCCTTGTACCACTCAATTACAAAATTGAATGCAACCAGCTACCAAATTTGTTATGCTGCTCCACCCCATATTGTTTCAGATGGCTTATGGGGAGGCCATAAAAATGGCAGGACTCCAATGAAATCATTCTTCCCCATATTTGAGTTACAGATCCTTATAATTTTTGCTATCTCCCAAATCTTCCGTTTCATCCTCAAGCCCTTGAGAGTCCCTCTATTTATTTCACAAATGATGGCTGGCCTAATTATAGGTACTTCATTTGAGATAGAGGGACTGGGCACATACATGAAGATGTTGTTCCCTTATGGAACTCATGACATCATTTCAACAATATCATCACTTGGTTTAACACTCTTCATTTTTATAAATGGTGTGCAAATGGATTTTAGCATGATAACAAGGACAGGAAACAGGGCATGGGCTATTTCCATAATTGGATTGGTAACACCAATCTTTATTGGTTTTACACTACCAGCCTTACTGTCTGATAAATTAGACACAAACCATGTCAGTGATATGTATATTTCATTGGTATCACACACAATAAGTTCATTTGCTGTCATTGCTTCCCTCCTCAATGAGCTTTGCATCCAAAACTCTGAGCTTGGGAGATTGGCATTGTCCTCAGCATTGGTGAGTGATGTGTTGAGCACATTTGTTGCATCCGTTGGTGTTGCTTTAGTGAGCGTTGACATGAAAGTGATTACAAGAAACTTGTTCTCATTGTTTTCCTTTGCTGCCCTTATTCCATTAATCTGTCGACCAGCAATGTTTTGGATCATCAAACGCACCCCAGAAGGAAGACCTGTGAAGGATGGTTACATTTATGTTATCATAGCAATGGTCTTTGGTTTAGGCTTTGTTGCAGTTGAGATAAATCAAGAATTTGTCTTGGGAGCTTTCATTTTGGGACTGTCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTTAAGAAGCTTCAGTTCTTTGGTACCTCATTCTTTTTGCCAATCTATGTGACTACATGTGTGTTGAGGACAGATTTTTCCCTGGTTTATTCATCATCAATGGTTTTGATCACTGTTTTGATAGTCCTTTTTACTCACTTGGTCAAAATAATAGCATGCTTTCTACCTCTCTTCTTTTGCAACATGCCCACCACTGATGCTTTGTCAGTTGCCCTCATTTTGAACACCAAAGGAGTAGTGGAAATTGGCCTCTACTGTGCCTTATACGACAGTAATCTGATCAGTGGCCAATTATATGGATTGATGATGATCAGTGTAGTGGTCATAGCATGCATTGTGCAATGGTCAGTGAAGTTTTTGTATGATCCTTCAAGAAAATATGCTAGCTACCACAGAAGGAACATTATGAGTTTAAGACCCCACTCTGAGCTGAGAATACTTGTATCCATTCATAAACCAAACCATATTGCTCCTATGATAGATTTCCTTGACCTCTGTTATCCAACAACAGAACACCCCATCACTGTGGATGTAGTGCATTTAATTGAGCTAGTTGGGAGAGCCTTGCCCCTTTTCATTCCCCATTGTCTTCAAAGACAAGTATCAGGCTCTCAAAGATCATACTCAGATGATGTCATTCTTGCTTTCAACATTTTTGAACATGATAATCAACATGCAGCAACAATAAACACTTACACAGCAATATCTCCAACTCACCTCATGTATGAAGATGTTTGCCATCTAGCATTGGACAAAGTTGCATCCATAATAATTCTTCCATTTCATCAAAGATGGTCTAGTGATGGTGCAGTCTTATCTGATGACAAGAATATAAAGACACTAAATCGTAAGGTCCTAGAAATAGCTCCATGCTCTGTTGGAATCCTTGTAGTTCGTGGTTCCCAATCAAGTACAATAGGCTCAACCACTAGATTAGCCATAATTTATTTGGGTGGAGAAGATGATGAAGAGGTTTTGTGCTTAACCAAAAGAGCAACAAGGAACCCTGAGATTGACATAGTTATTTACCACCTTATTTGTAAAGATTACATAGCAGAATTGGAGGACCTAATGGTAGCGGGTCATGATGTGTTACAAGATGTGAAGAATGCACATAATGTAAGGTATCAAGAAATATTTACAAAGGATGGATCGGACACAGTTGCTTTTCTAAGGGACATAGTGAATGATCATGATTTTTTCATAGTTGGGAGAAGGCATGGGATAAACTCACCTCAAACTGATGGACTTACACATTGGAGTGAGTTTCCAGAATTAGGTGTCATTGGTGATTTTCTTTCTTCACCAGATTTTAAGAGCCATGCATCTATTTTGGTGGTGCAGCAACAACTCGCGCGTAAGGCACGTCGCCAAGGGTGGAAGTTTTAG 2361 0.3935 MSLNASESLYHSITKLNATSYQICYAAPPHIVSDGLWGGHKNGRTPMKSFFPIFELQILIIFAISQIFRFILKPLRVPLFISQMMAGLIIGTSFEIEGLGTYMKMLFPYGTHDIISTISSLGLTLFIFINGVQMDFSMITRTGNRAWAISIIGLVTPIFIGFTLPALLSDKLDTNHVSDMYISLVSHTISSFAVIASLLNELCIQNSELGRLALSSALVSDVLSTFVASVGVALVSVDMKVITRNLFSLFSFAALIPLICRPAMFWIIKRTPEGRPVKDGYIYVIIAMVFGLGFVAVEINQEFVLGAFILGLSVPEGPPLGSALVKKLQFFGTSFFLPIYVTTCVLRTDFSLVYSSSMVLITVLIVLFTHLVKIIACFLPLFFCNMPTTDALSVALILNTKGVVEIGLYCALYDSNLISGQLYGLMMISVVVIACIVQWSVKFLYDPSRKYASYHRRNIMSLRPHSELRILVSIHKPNHIAPMIDFLDLCYPTTEHPITVDVVHLIELVGRALPLFIPHCLQRQVSGSQRSYSDDVILAFNIFEHDNQHAATINTYTAISPTHLMYEDVCHLALDKVASIIILPFHQRWSSDGAVLSDDKNIKTLNRKVLEIAPCSVGILVVRGSQSSTIGSTTRLAIIYLGGEDDEEVLCLTKRATRNPEIDIVIYHLICKDYIAELEDLMVAGHDVLQDVKNAHNVRYQEIFTKDGSDTVAFLRDIVNDHDFFIVGRRHGINSPQTDGLTHWSEFPELGVIGDFLSSPDFKSHASILVVQQQLARKARRQGWKF. 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01415 786 Pfam Sodium/hydrogen exchanger family 59 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g01415 786 Gene3D - 54 453 IPR038770 -
Seca6g01415 786 PANTHER CATION/H + ANTIPORTER 30 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01415 Seca-Chr6 62737010 62740077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01415 23 774 Antiporter Super Family AT5G22900 36.600 4.34e-154 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01415 K26731 - gmx:100785062 1006.51