Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01389 ATGGTTGTGTCTAATTCCTTATCATGCTCTCTGCCCCAACTGTGTTTCTGCATGTCATTTGTGAAAGATGCTGCAAGGTATATAGTTGTTCGGTTCATGATTGGGTTCTCCCTGGCCACTTTTGTCTCATGCCAATACTGGATGAGTACAATGTTCAACAGTAAGATAATAGGGCTTTTAAATGGGACAGCAGCTGGTTGGGGTAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCATTGGTCTATGAATTGATTCGGCGAGCTGGGGCTACTCCCTTCACTGCATGGAGGATTGCCTTCTTCATCCCTGGCTGGTTGCATGTCCTCTTGGGCATCCTGGTCTTAACCCTAGGCCAAGATTTACCTGATGGCAACCTTGGTGCCTTACAGAAGAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTGTTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTCCTCTATGGGTACTCTATGGAAGTTGAATTAACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGGTTTAATCTCAAGTTGCATACTACTGGAATCATTGCAGCTTCATTTGGAATGGCAAACCTTGTTGCTCGCCCCTTTGGTGGATATGCCTCTGATGTTTCAGCTCGGTTGTTTGGCATGAGAGGTAGACTTTGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGATAG 714 0.458 MVVSNSLSCSLPQLCFCMSFVKDAARYIVVRFMIGFSLATFVSCQYWMSTMFNSKIIGLLNGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWLHVLLGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMEVELTTDNVIAEYFYDRFNLKLHTTGIIAASFGMANLVARPFGGYASDVSARLFGMRGRLWREGGRERERER. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01389 237 Gene3D MFS general substrate transporter like domains 2 126 IPR036259 -
Seca6g01389 237 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 226 IPR044772 GO:0015112
Seca6g01389 237 Pfam Major Facilitator Superfamily 3 214 IPR011701 GO:0022857|GO:0055085
Seca6g01389 237 SUPERFAMILY MFS general substrate transporter 15 216 IPR036259 -
Seca6g01389 237 Gene3D MFS general substrate transporter like domains 137 228 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01389 Seca-Chr6 61977798 61978755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01389 16 226 Inorganic Solute Cotransporters AT5G60770 80.095 6.26e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01389 K02575 - gmx:547946 384.03