Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01377 ATGACTTTATTTGTAGGTTTGGAATATCTACATAATGGTTGTACTCCCCAAATTGTACATAGAGATGTTAAGACTAGAAATATTTTACTTGATGAAGATTTTCATGGTAAAATATCAGATTTTGGGTTATCAAGAATCTTTTCAGATGAATGTGACACCCATGTGTCAACAATAATTGCAGGCACCCCTGGATATCTAGATTGCAGATACTACAAAACAAACAAGTTGACTGAAAAAAGTGATGTATTTAGTTTTGGAATTGTTCTCTTAGAAATAATCATAGGGCAGCCTGTTATATTAAAAACCCATGAGAACACTCACATAATTCAATGGGTAAGTTCCATATTAGATGTTAAAAAAGAAATTGATACTATTATAGATTCAAGGTTACAAGGAAGATATGACATTGAGATTGCAAAGAAAGTACTACATGTTGCAATGGCTTGTGTAGCTACGACTTCTATTCATAGGCCAACAATGAATCAAGTGATGATAGAATTAAGTCAATGTTTGTCCATGGAGAATAATAGTAGTACATCCAATGAAACATCAATGGAGCCTATAAGTGGAGAGAGTTCTCTTGCAAGGTAG 591 0.3316 MTLFVGLEYLHNGCTPQIVHRDVKTRNILLDEDFHGKISDFGLSRIFSDECDTHVSTIIAGTPGYLDCRYYKTNKLTEKSDVFSFGIVLLEIIIGQPVILKTHENTHIIQWVSSILDVKKEIDTIIDSRLQGRYDIEIAKKVLHVAMACVATTSIHRPTMNQVMIELSQCLSMENNSSTSNETSMEPISGESSLAR. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01377 196 SUPERFAMILY Protein kinase-like (PK-like) 4 167 IPR011009 -
Seca6g01377 196 PANTHER OS07G0107800 PROTEIN-RELATED 6 175 - -
Seca6g01377 196 Pfam Protein kinase domain 3 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01377 196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Seca6g01377 196 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01377 196 MobiDBLite consensus disorder prediction 175 196 - -
Seca6g01377 196 Gene3D Transferase(Phosphotransferase) domain 1 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01377 Seca-Chr6 61542802 61543589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01377 6 174 Receptor kinase-like Gene Family AT1G51800 58.580 6.92e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca6g01377 Pkinase 2.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01377 - - aprc:113851009 271.937