Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g01377 | ATGACTTTATTTGTAGGTTTGGAATATCTACATAATGGTTGTACTCCCCAAATTGTACATAGAGATGTTAAGACTAGAAATATTTTACTTGATGAAGATTTTCATGGTAAAATATCAGATTTTGGGTTATCAAGAATCTTTTCAGATGAATGTGACACCCATGTGTCAACAATAATTGCAGGCACCCCTGGATATCTAGATTGCAGATACTACAAAACAAACAAGTTGACTGAAAAAAGTGATGTATTTAGTTTTGGAATTGTTCTCTTAGAAATAATCATAGGGCAGCCTGTTATATTAAAAACCCATGAGAACACTCACATAATTCAATGGGTAAGTTCCATATTAGATGTTAAAAAAGAAATTGATACTATTATAGATTCAAGGTTACAAGGAAGATATGACATTGAGATTGCAAAGAAAGTACTACATGTTGCAATGGCTTGTGTAGCTACGACTTCTATTCATAGGCCAACAATGAATCAAGTGATGATAGAATTAAGTCAATGTTTGTCCATGGAGAATAATAGTAGTACATCCAATGAAACATCAATGGAGCCTATAAGTGGAGAGAGTTCTCTTGCAAGGTAG | 591 | 0.3316 | MTLFVGLEYLHNGCTPQIVHRDVKTRNILLDEDFHGKISDFGLSRIFSDECDTHVSTIIAGTPGYLDCRYYKTNKLTEKSDVFSFGIVLLEIIIGQPVILKTHENTHIIQWVSSILDVKKEIDTIIDSRLQGRYDIEIAKKVLHVAMACVATTSIHRPTMNQVMIELSQCLSMENNSSTSNETSMEPISGESSLAR. | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g01377 | 196 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 167 | IPR011009 | - | |
Seca6g01377 | 196 | PANTHER | OS07G0107800 PROTEIN-RELATED | 6 | 175 | - | - | |
Seca6g01377 | 196 | Pfam | Protein kinase domain | 3 | 164 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca6g01377 | 196 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 18 | 30 | IPR008271 | GO:0004672|GO:0006468 | |
Seca6g01377 | 196 | ProSiteProfiles | Protein kinase domain profile. | 1 | 171 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca6g01377 | 196 | MobiDBLite | consensus disorder prediction | 175 | 196 | - | - | |
Seca6g01377 | 196 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 192 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g01377 | Seca-Chr6 | 61542802 | 61543589 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g01377 | 6 | 174 | Receptor kinase-like Gene Family | AT1G51800 | 58.580 | 6.92e-66 | 215 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Seca6g01377 | Pkinase | 2.4e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g01377 | - | - | aprc:113851009 | 271.937 |