Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g01342 | ATGGCTTTGGCTTCATCATCAACAACAACTAAACAAGTTGGTGGTCGAAGGTTGCTTCTTTCAGATGGCTTCCCCGATTGGCTATCTTCTTCAGATAGAAAGCTTTTTCAGACATCACCAAAAGTTGATATTGTGGTGGCTCAAGATGGCACTGGGAATTATAAGACCATATCAGAAGGTGTGGCTGCAGTTGCTAAGCTTAGTGGAAAAAGGGTAGTTGTTATTCACGTCAAAGCAGATGTTTATAAAGAGAGTGTTGACATTAAGAGGTCAATTAAGAACTTGATGATCATTGGATATGGGATGGGTTCCACTATTGTTACTTGTAATAATAACGCACAAGATGGCTCCACTACGTTTCGTTCAGCCACTTTCGGGAATGAAGAAGACATACCTGCTACGGGAATGAAGCTCTTGAGGAAGCCAACAATGGCGGACTGA | 441 | 0.4195 | MALASSSTTTKQVGGRRLLLSDGFPDWLSSSDRKLFQTSPKVDIVVAQDGTGNYKTISEGVAAVAKLSGKRVVVIHVKADVYKESVDIKRSIKNLMIIGYGMGSTIVTCNNNAQDGSTTFRSATFGNEEDIPATGMKLLRKPTMAD. | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g01342 | 146 | PANTHER | PECTINESTERASE | 18 | 128 | - | - | |
Seca6g01342 | 146 | Gene3D | - | 38 | 138 | IPR012334 | - | |
Seca6g01342 | 146 | Pfam | Pectinesterase | 43 | 128 | IPR000070 | GO:0030599|GO:0042545 | |
Seca6g01342 | 146 | SUPERFAMILY | Pectin lyase-like | 39 | 127 | IPR011050 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g01342 | Seca-Chr6 | 60059397 | 60059837 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g01342 | 16 | 126 | Carbohydrate Esterase | AT1G23200 | 56.410 | 9.52e-34 | 122 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g01342 | - | - | gmx:100816802 | 186.422 |