Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01268 ATGGGGTTACCAAGTCCTATACTTCACTTTCTCCTCCTATCTCTTGTTATCTCTCTATTGCACAGACCCAGTTTTGCAGTGAAAAAGTCATATGTGGTGTACTTGGGAGCCCACTCACATGACCCAGAATTGTCTTCAGTTCATTTCAACCATGTCACAGAGTCCCACTATGAGTTTCTGGGATCTTTCTTGGGAAGATATAGTCCTAATACAGCCAAAGAATCCATCTTTTACTCCTACACAAGGCACATCAATGGCTTTGCTGCAAATTTAGAAGAAGAAGTAGCAGCTGAGATAGCAAAGCATCCCAAGGTATTGTCAGTGTTTGTGAACAGTGGAAGAAAACTACACACCACACGGTCATGGGGATTCATGGGGCTAGAAGAGGATAATGGGGTGATCTCAACTAGCTCAATATGGAACAAAGCCAGATTTGGTGAAGGTGTGATTATAGGAAACCTTGATACAGGTGTTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCAAAGTGGAGAGGAATTTGTGATAACGGGATTGATGCTAGTTTTCACTGCAACAGGAAGCTAATAGGGGCAAGATACTTCAACAAAGGCTATGCATCTGTTGCTGGCCCACTCAATTCCTCCTTTGACTCACCTAGAGACAATGAAGGCCATGGATCCCACACTCTATCAACAGCTGGTGGTAACATGGTACCTGGAGTCAGTGTCTTTGGCCAGGGCTCTGGAACAGCAAAAGGTGGCTCACCAAGAGCCAGGGTGGCAGCATACAAGGTCTGTTGGCCCCCAATTAGTGGTGATGAGTGCTTTGATGCAGATATACTTGCTGGTTTTGATATGGCCATCCATGATGGAGTTGATGTGTTGTCTGTGTCACTTGGTGGCTCTGCCTCTGCATTTTTCAATGATAGTGTTTCCATTGGATCCTTCCATGCTGCTAAGAAAGGGATTGTGGTTGTTTGCTCTGCTGGCAATAGTGGACCTGCTGATGCTACTGCAGAAAACCTTGCACCATGGTATATCACAGTTGGTGCCAGCACAATGGATAGAGAGTTCCCTAGTTATGTTGTCCTTGGTAACATGATAAGCCTGAAGGGTGCAAGTTTATCAGCTGCAAGATTGGCACACAAGTTCTATCCAATTATTAAAGCTACAGGTGCTAAATTGAATTCACCTTTGAATAAAATTTATATAAACCAATGTAATGTAGTTCAACTATGCAGTGTGCTGTGCCAAAATGGAACTCTTGATCCCAACAAGGTAAAAGGAAAGATTGTAGTATGCCTCCGAGGGGTAAATGCACGAGTGGACAAAGGAGAGCAAGCTTTGCTAGCTGGTGCTGTGGGAATGGTCCTTGCCAATGATAAGAGTAATGGCAATGAAATTTTAGCTGATCCTCATCTCCTTCCTGCTTCTCATATCAATTTCACTAATGGTGTTGCTGTCTTTGATTACATCAACTCAACCAAGTTCCCTGTGGCTTATATTACACATCCAAAGACAAAATTGCATACTAAGCCAGCCCCCTTCATGGCAGCATTTTCATCCAAAGGACCAAACACTATTGTACCAGAGATCCTAAAGCCTGATATCACTGCACCAGGAGTGTCAGTTATAGCTGCCTACACTGAAGCTGAAGGGCCAACTAATCAAGAGTTTGACAAGCGCCGGATTCCATATAACTCAGTCTCAGGCACATCAATGTCATGCCCTCACATTTCAGGCATTGTGGGTTTGTTGAAAACCCTATATCCTTCATGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACGGCTACAACACTAGATAATGAGGTGGAGCCACTATTGAATGCTACTGACAGCCAGGCAACACCATTTAGTTATGGGGCAGGACATGTTGAACCAAACAGAGCAATGGATCCTGGCCTTGTCTATGACACAACAATGGATGATTACGTGAACTTGTTGTGTGCTTTAGGTTATAATGAAACACAAATCTCAATGTTTACAGAAGATCCTTATCAATGCCACAAGAATTTTAGTCTCCTCAACCTAAACTATCCTTCAATCACAGTCCCAAATCTCTCCGGGTCAGTAACAGTTACAAGGACATTAAAAAATGTTGGTTCTCCAGCAACATATATTGCTCACGTTCAAAACCCAAATGGGATCAGCATTTCAGTGGAGCCAAACATCTTGAAGTTCAAAAAGGTTGGTGAAGAAAAGAGCTTTAAAGTAACCTTGAAAGTCAAGCAAGGAAAAGCAACAAATAACTATGTGTTTGGAAAGTTGATATGGTCAGATGGCAAGCATTATGTCAGGAGTCCTATAGTTGTGAAGGCACTCTAG 2352 0.4298 MGLPSPILHFLLLSLVISLLHRPSFAVKKSYVVYLGAHSHDPELSSVHFNHVTESHYEFLGSFLGRYSPNTAKESIFYSYTRHINGFAANLEEEVAAEIAKHPKVLSVFVNSGRKLHTTRSWGFMGLEEDNGVISTSSIWNKARFGEGVIIGNLDTGVWPESKSFSDEGFGPIPSKWRGICDNGIDASFHCNRKLIGARYFNKGYASVAGPLNSSFDSPRDNEGHGSHTLSTAGGNMVPGVSVFGQGSGTAKGGSPRARVAAYKVCWPPISGDECFDADILAGFDMAIHDGVDVLSVSLGGSASAFFNDSVSIGSFHAAKKGIVVVCSAGNSGPADATAENLAPWYITVGASTMDREFPSYVVLGNMISLKGASLSAARLAHKFYPIIKATGAKLNSPLNKIYINQCNVVQLCSVLCQNGTLDPNKVKGKIVVCLRGVNARVDKGEQALLAGAVGMVLANDKSNGNEILADPHLLPASHINFTNGVAVFDYINSTKFPVAYITHPKTKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTNQEFDKRRIPYNSVSGTSMSCPHISGIVGLLKTLYPSWSPAAIKSAIMTTATTLDNEVEPLLNATDSQATPFSYGAGHVEPNRAMDPGLVYDTTMDDYVNLLCALGYNETQISMFTEDPYQCHKNFSLLNLNYPSITVPNLSGSVTVTRTLKNVGSPATYIAHVQNPNGISISVEPNILKFKKVGEEKSFKVTLKVKQGKATNNYVFGKLIWSDGKHYVRSPIVVKAL. 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01268 783 SUPERFAMILY Subtilisin-like 116 644 IPR036852 GO:0004252|GO:0006508
Seca6g01268 783 FunFam Subtilisin-like protease SBT1.5 148 404 - -
Seca6g01268 783 Pfam PA domain 417 486 IPR003137 -
Seca6g01268 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Seca6g01268 783 CDD PA_subtilisin_like 361 502 - -
Seca6g01268 783 Gene3D - 657 783 - -
Seca6g01268 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 780 IPR045051 -
Seca6g01268 783 FunFam Subtilisin-like protease SBT5.3 20 117 - -
Seca6g01268 783 FunFam subtilisin-like protease SBT1.5 355 509 - -
Seca6g01268 783 Gene3D - 355 510 - -
Seca6g01268 783 Pfam Subtilase family 146 618 IPR000209 GO:0006508|GO:0008236
Seca6g01268 783 FunFam Subtilisin-like protease SBT1.5 657 783 - -
Seca6g01268 783 Pfam Peptidase inhibitor I9 30 117 IPR010259 -
Seca6g01268 783 Pfam Fibronectin type-III domain 685 780 IPR041469 -
Seca6g01268 783 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Seca6g01268 783 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Seca6g01268 783 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Seca6g01268 783 ProSiteProfiles Serine proteases, subtilase domain profile. 121 640 - -
Seca6g01268 783 CDD Peptidases_S8_3 115 607 IPR034197 -
Seca6g01268 783 SUPERFAMILY PA domain 415 497 IPR046450 -
Seca6g01268 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Seca6g01268 783 Gene3D Peptidase S8/S53 domain 148 653 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01268 Seca-Chr6 51431225 51440737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01268 30 781 Subtilisin-like Serine Gene Family AT2G04160 64.371 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01268 - - gmx:100794807 1310.05