Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01253 ATGGCTATGGTTTCGACAGGCTACCATGCTATCAAAAATCTGTGTGGAAGGAGGGAGAGCTGGAGACTCAAAGTTAAACTGGTCCGAATTTGGAATATGTGTGCTCTTGCTACACCTGAGGAACCCTTTGCTCTCCAGATGGTTTTATTTGATGATGGGGATATGATAGAAGCAACTGTTTTGAAGCAGAACATGAGGAGATTTGCCAATGTGATGGTGGAGGGTCAGGTGTATAAGCTCACGAACTTCGGGGTGATGCTGAGCAAATGTAACTTTAGAGCATCTGGACATGACTATAAGATCATCTTCAATGCAAACACAAAGAATAATGTCGTTGTTGCTGCTGTTATACCTCATATGGGATTGAAGTTCGTTAAGACATCCGATATAAAAAATACCAATGACCATTCGGACTACCTCTTGGACTTCGTGGGAATTGTAACGGCTGTGTTCGAAGAGATGAACTTGAACAGGCAAGGCAGGCCTACACGTTTAATGCTAATAGATATGGTCGATGAAATGGGGAAGATAAGGTGTGCAGTCTTTGGGCAACTGATTGATGCAATTTGTGGCTTCCTCTCTGTTTCTCAGACAAACCTTCCTGTCATGATTTTTCAGTTGGCGAGGGTTAACCTTTACAAGGGTGAGATCGGGATCCAGAACGTTATGAACGCTACTAAGATTTGGTGGAATCTAGATATAGCAGAGGCTGTGGAATTCAAGGTCCTTTTCTCACCCATTGATGCATTGTGTTAA 756 0.4286 MAMVSTGYHAIKNLCGRRESWRLKVKLVRIWNMCALATPEEPFALQMVLFDDGDMIEATVLKQNMRRFANVMVEGQVYKLTNFGVMLSKCNFRASGHDYKIIFNANTKNNVVVAAVIPHMGLKFVKTSDIKNTNDHSDYLLDFVGIVTAVFEEMNLNRQGRPTRLMLIDMVDEMGKIRCAVFGQLIDAICGFLSVSQTNLPVMIFQLARVNLYKGEIGIQNVMNATKIWWNLDIAEAVEFKVLFSPIDALC. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01253 251 Gene3D - 116 247 IPR012340 -
Seca6g01253 251 Pfam Domain of unknown function DUF223 52 108 IPR003871 -
Seca6g01253 251 CDD RPA1_DBD_A_like 22 108 - -
Seca6g01253 251 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
Seca6g01253 251 SUPERFAMILY Nucleic acid-binding proteins 122 244 IPR012340 -
Seca6g01253 251 Gene3D - 8 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01253 Seca-Chr6 50607859 50609045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01253 9 244 Core DNA Replication Machinery Family AT4G19130 23.810 6.81e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01253 - - lja:Lj0g3v0341019.1 192.971