Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01224 ATGTTAAAATCTGTGGAACTCCCAGATTGTTTCTATCCTAGGCCACCAATGACCATCCTCCCAAGTGCTCCAACACCAAAGCATTCTATCTCTCTCTCTAGTTTTGACAACCAAGAGTTCATAAGGTTGCCAGTCCAGTATATGTTTATCTTCAAGAAATCTGTGAGCTTTGATATCTTGAAGTCTGCTCTGTCCAAAGTTCTGGTGCATTACTACCCATTAGCTGGGAGATTGAAGACAAGCATTGAGGATGATCACAAGCTTACGGTGGATTGCAATGGAGAAGGTGCTGTGTTTGCTGAGGCTTACATGGATGTCACTGCTGAAGAATTACTCAAATCTTCCGATATGCATAACAAGTCTTGGAGGAAGCTCTTGTGTGAGGTTGAAGCTCAGAGTTTCTTAGATTTTCCTCCTCTTGTAATCCAGGTGACAGGTCTTCGTTGTGGGGGAATGATCCTGTGCACGGCGATTAACCACAACCTATGCGATGGCACCGGGGCCTCACAGTTTATACATGCATGGGCCCAACTCACCAAGCAACCTAACACCGAATTGACAAAAATACCCTTTCACGGGAGACACGTGTTAAAAAGTCGAGATCCCCCACAAGTAAAGTTCCCTCATCCGGGATACACTAGAACAAACCCCTCCCATCAAGTGGACATGTTCGAGTGGATACTCTCCCAGCAACTAGTTTCCACATCATTTACCTTCGGACCCACCGAAGTGCTTGGCTTGAAGAAGCAGTGCGAGTCGTCGTTGAAGCGCATCACCACCTTTGAAGTGGTGGTTGCACACACGTGGCGCTCATGGGTTCGATCACTAAACATGTCCTCCACTCTCGTTACGAAGCTCCTTTTCGCGGTCAACATAAGGGAAAAAATGAAACTCCCAAAAGGGTATTATGGGAATGGTGTCGTTCTAGCATGTGCTGAGAGCACAGTGCATGCCTTGTTGGCTACTAATAACTTGCGTCATGGTTTGAAACTTGTACAAGAAGCCAAGGCTACTCTAGACGATGATGAGTACATAAGGTCCACCATTGATTTGGTGGAGGATAAGAGGGTGAGGCCTGATTTTTCTACAAGCTTGGCTATATCACAATGGTCAAGGCTAGGACTGGCAGAAGTGGATTTTGGAGAAGGTAAACCATTATATATTGGTCCTTTAACAAGTCATGTTTATTGCTTGATTCTACCGGTTGTTGGAGTTGCAAATGCGGTGAAGATACTTATGTCGCTACCAGAGAGTGTCGTAGAAAGCTTTCAGCATCACATAATGAAGACTGAGAGTTGGGAATAG 1305 0.4529 MLKSVELPDCFYPRPPMTILPSAPTPKHSISLSSFDNQEFIRLPVQYMFIFKKSVSFDILKSALSKVLVHYYPLAGRLKTSIEDDHKLTVDCNGEGAVFAEAYMDVTAEELLKSSDMHNKSWRKLLCEVEAQSFLDFPPLVIQVTGLRCGGMILCTAINHNLCDGTGASQFIHAWAQLTKQPNTELTKIPFHGRHVLKSRDPPQVKFPHPGYTRTNPSHQVDMFEWILSQQLVSTSFTFGPTEVLGLKKQCESSLKRITTFEVVVAHTWRSWVRSLNMSSTLVTKLLFAVNIREKMKLPKGYYGNGVVLACAESTVHALLATNNLRHGLKLVQEAKATLDDDEYIRSTIDLVEDKRVRPDFSTSLAISQWSRLGLAEVDFGEGKPLYIGPLTSHVYCLILPVVGVANAVKILMSLPESVVESFQHHIMKTESWE. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01224 434 Gene3D - 226 429 IPR023213 -
Seca6g01224 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 419 - -
Seca6g01224 434 Gene3D - 15 214 IPR023213 -
Seca6g01224 434 Pfam Transferase family 18 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01224 Seca-Chr6 48673401 48678324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01224 59 390 Monolignol Biosynthesis Gene Families AT5G48930 30.372 1.38e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01224 - - gmx:100797134 603.208