Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01223 ATGATCCTGTGCACGGCCATCAACCACAACCTATGCGATGGCACCGGGGCCTCACAGTTTATATATGCATGGGCCCAACTCACCAAGCAACCTAACACCGAATTGACAATAATACCCTTTCACGAGAGACACGTGTTAAAAAGTCGAGATCCCCCACAAGTAAAGTTCCCTCACCCGGGATACACTAGCACAAACCCCTCCCATCAAGTGGACATGTTCGAGTGGATACTCTCCCAGCAACTAGTTTCCACATCATTTACCTTCGGACCCACCGAAGTGCTTGGCTTGAAGAAGCAACGCGAGTCGTCGTTGAAGCGCATCACCACCTTTGAAGTGGTGGTTGCACACACGTGGCGCTCATGGGTTCGATCACTAAACCTGTCCTCCACTCTCGTTACGAAGCTCCTTTTCGCGGCCTTGTTGGCTACTAATAACTTGCGTCATGGTTTGAAACTTGTACAAGAAGCCAATGCTACTCTAGACGATTATGAGTACATAAGGTCCACCATTGATTTGGTGGAGGATAAGAGGGTGGGGCCTGATTTTTCTACAAGCTTGGCTATATCACAATGGTCAAGGCTAGGACTGGCAGAAGTGGATTTTGGAGAAGGGAAACCATTATATATTGGTCCTTTAACAAGTCATGTTTACTGCTTGATTCTACCGGTTGTTGGAGATGCAAATGCGGTGAAGATACTTATGTCGCTACCAGAGAGTGTCGTAGAAAGCTTTCAGCATCACATAATGAAGACTGAGAGTTGGGAATAA 768 0.4701 MILCTAINHNLCDGTGASQFIYAWAQLTKQPNTELTIIPFHERHVLKSRDPPQVKFPHPGYTSTNPSHQVDMFEWILSQQLVSTSFTFGPTEVLGLKKQRESSLKRITTFEVVVAHTWRSWVRSLNLSSTLVTKLLFAALLATNNLRHGLKLVQEANATLDDYEYIRSTIDLVEDKRVGPDFSTSLAISQWSRLGLAEVDFGEGKPLYIGPLTSHVYCLILPVVGDANAVKILMSLPESVVESFQHHIMKTESWE. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01223 255 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 240 - -
Seca6g01223 255 Gene3D - 65 139 IPR023213 -
Seca6g01223 255 Gene3D - 140 250 IPR023213 -
Seca6g01223 255 Gene3D - 1 63 IPR023213 -
Seca6g01223 255 Pfam Transferase family 1 138 - -
Seca6g01223 255 Pfam Transferase family 142 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01223 Seca-Chr6 48669173 48670024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01223 3 250 Monolignol Biosynthesis Gene Families AT5G48930 23.208 2.05e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01223 - - aip:107645267 322.398