Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01213 ATGGATTGGTTTAAGAGAAATAAAAGTCAACTCTTAACTTTTTGTATGATGATCTTCCTTGTACTCCCAACTCTAGTTGTTGCAGAATGTACATGTGACCCAGAAGGTGAAGAGAGGGATAAATCCAAAGCTCTAAGGTACAAAATAGCAGCTTTAGTGTCAATACTAGTTGCCAGTGCAATTGGTATTTGTATTCCACTCCTTGGCAAAGTGATACCTGCTTTAAGCCCTGAGAAAGATATCTTCTTTATCATTAAGGCCTTTGCTGCTGGTGTTATATTGTCCACTGCTTTCATTCATGTGTTGCCTGATGCTTTTGATAACCTCACTTCCCCTTGTCTAAATGAACATCCATGGGCTGAATTTCCCTTCACTGGGTTTGTGACTATGTGCACTACTATGGGGTCCCTTATGGTTGATACTTATGCCACTGCTTATTTTCAGAAAAGGCATCTCAAGAGTGGCCAAGTTGATGCAACAGATGTGGAGAATGAAGAATCAGGGCATGAAGGACATGTGCATGTTCACACCCATGCAACACATGGTCATGCTCATGGTCATGTTTCTTCTGAGTCCTCAGAACTTCTTCGCCATAGGGTCATATCACAGGTGCTGGAGTTGGGGATTATTTTTCATTCTGTCATAATAGGGATTTCATTGGGAGCTTCAGAGAGTCCCAAAACAATAAGGCCTCTTGTAGCAGCTCTGACTTTTCATCAGTTCTTTGAGGGCATGGGACTTGGAAGTTGCATAACTCAGGCAAAATTTGAGAGGTTATCTGTTACAATTATGGGATTGTTCTTCGCATTAACAACTCCAATAGGGATTGGAATTGGTTTAGGGATCACTAATAGTTACGATGAAAACAGTCCAACTGCCCTTATTATTGAAGGAATCTTCAATGCAGCTTCAGCTGGGATCTTAATATATATGGCACTTGTAGATCTTCTTGCAGCTGATTTTATGAATCCAAGGATGCAGAAAAATAGTAGGCTTCAATTAGGATCCAATCTGTCTCTTCTGCTAGGAGCTGGTTGCATGTCTGTTCTTGCCAAATGGGCTTAA 1065 0.4094 MDWFKRNKSQLLTFCMMIFLVLPTLVVAECTCDPEGEERDKSKALRYKIAALVSILVASAIGICIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTAFIHVLPDAFDNLTSPCLNEHPWAEFPFTGFVTMCTTMGSLMVDTYATAYFQKRHLKSGQVDATDVENEESGHEGHVHVHTHATHGHAHGHVSSESSELLRHRVISQVLELGIIFHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQAKFERLSVTIMGLFFALTTPIGIGIGLGITNSYDENSPTALIIEGIFNAASAGILIYMALVDLLAADFMNPRMQKNSRLQLGSNLSLLLGAGCMSVLAKWA. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01213 354 Pfam ZIP Zinc transporter 47 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca6g01213 354 PANTHER ZINC/IRON TRANSPORTER 44 348 - -
Seca6g01213 354 NCBIfam ZIP zinc/iron transport family 35 354 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01213 Seca-Chr6 48147717 48150436 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01213 7 354 Inorganic Solute Cotransporters AT3G12750 52.408 2.29e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01213 K14709 - gmx:547695 524.628