Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01198 ATGTCTCCTTTTATGAGAAGTGTTCCCCTGCTTTGGTTTCTTATAATATTGCTTTCAGCCAGCAATATTGCTCTTGGAAAAATACATGTGCAGGTCGTAAATCAAATGATAAGCAATTTGGACTTAACCTTGCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCGTGGGAATTTAGTTTTAACCCTTCCATTTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGAAAGATTATGCTGGAGTTGAACAGAAATGGTTTGATATATACAAAGGAAATAGGGATGATTGCATAATTTGTACTTGGTATATAAACCAAGATAAACCATGTAGGTACGTTTCAGATAAGGTGTCTAAATGCATTGAATGGAATAATTAA 405 0.3556 MSPFMRSVPLLWFLIILLSASNIALGKIHVQVVNQMISNLDLTLHCKSKDDDLGVQLLHPSESWEFSFNPSIFFWTTQFYCLFQWKDYAGVEQKWFDIYKGNRDDCIICTWYINQDKPCRYVSDKVSKCIEWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01198 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca6g01198 134 PANTHER - 26 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01198 Seca-Chr6 47512123 47512527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01198 27 134 Carbohydrate Esterase AT3G16970 37.931 1.65e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01198 - - cam:101513244 108.227