Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01196 ATGAGAACCTCCGATAATCTTCTTCTTTTATACTTTCGAGGCTTGTGGTCTTCCTTGATAATTATCATAGTTTCTACCCTTTCCATTTTCAAAGTACTAAGTACTCACCAGATTAACAAAAGTAAAAAACACAAGTTTCCTTTGCCTCCTGGTCCAAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAACAGGCCTACATTCCGATGGATACACAAGTTGATGAAGGAAATGAACACTGAAATAGCTTGTATCCGCCTAGGAAATGTCCTTGTTGTCCCTGTGACATGCCCCACCATTGCTTGTGAATTTTTGAGAAAACAGGATGCGACTTTTGCATCTAGACCAATAAGCATATCCACTTTGCTCATTAGCAATAGATATTTGACCACAACTCTTGTACCTTTTGGAGAACAATGGAAGAAAATGAAAAAGATCATTGCAAATGATTTGCTCTCCACCTTGAAGCATCAACAACTTCAAGACAAAAGGGTTGGAGAAGCTGATAACTTTATGCTATATGTCTACAAAAAATGCAAAAATGACAATTTTGGCCTTGTGAATGTAAGGAATATAGCACAACATTATTGTTGTAATGTGATCAAGAGGCTGAGTTTCAATACAAGGTACTTTGGAAAGGGTGGGAAAGATGGAGGGCCTGGTTTTGAGGAAGTAGAACATCTAAATGCCCTTTTTACTTTGCTTAATCACATTTATGCCTTCTATGTTTCTGATTACATTCCATGTTTGAGGGGACTTGACTTGGATGGTCACGAGGCCAAAGTGATGGAGGCTATGGAAATTGTGAACAAGTACCACGATCCTATCATTGAACAAAGAATCAAACAATGGAATGATGGGTCAAGGATTGATGGAGAAGATTTCCTTGATATTTTGATCTCATTGAAAGATGCCAACAATAACCCAATATTGACACAGCAGGAAATCAAAGCGCAGATTATGGAGTTGATGCTTGCAACGGTGGATAATCCATCAAATGCATTTGAATGGGCTCTTGCTGAAATGATCAACCAACCTGAGTTGCTTCAACGAGCAGTTGAAGAATTGGACAATGTGGTAGGGAAAGAGAGACTTGTTTTAGAATCAGATATTCCTAAGCTCAACTATGTGAAGGCCTGTGCTAGAGAAGCTTTTCGCCTTCATCCCATTGTGCCTTTTAATGTTCCCCATGTCTCTATGAAAGACACAATTGTTGGAAATTACCTAATTCCAAAGGGTAGTCATGTATTGTTAAGCAGACAAGAACTTGGTCGAAGCCCAAAAGTTTGGAATGAACCAAACAAGTTCATACCAGAACGCCACCTCAGAAGTGATGGTTCCAATGTAGTTTTGACAGAGCCAGATTTGAAATTCATATCATTTAGCACAGGAAGGCGAGGTTGTCCTGGAATCAAGCTTGGCACCACAATCACTATAATGCTATTTGCTAGATTGCTTCATGGCTTCACTTGGGCTGCACCACCTAACATGTCAACCATCAAGCTTGTTGAGTCCAAAAATGATGTGCTTCTTGCCGAGCCACTTAAGGCTGTAGCAAAGCCAAGATTAGCAGCAAAGTTGTACCGATAG 1599 0.3996 MRTSDNLLLLYFRGLWSSLIIIIVSTLSIFKVLSTHQINKSKKHKFPLPPGPKPWPIVGNLPEMLANRPTFRWIHKLMKEMNTEIACIRLGNVLVVPVTCPTIACEFLRKQDATFASRPISISTLLISNRYLTTTLVPFGEQWKKMKKIIANDLLSTLKHQQLQDKRVGEADNFMLYVYKKCKNDNFGLVNVRNIAQHYCCNVIKRLSFNTRYFGKGGKDGGPGFEEVEHLNALFTLLNHIYAFYVSDYIPCLRGLDLDGHEAKVMEAMEIVNKYHDPIIEQRIKQWNDGSRIDGEDFLDILISLKDANNNPILTQQEIKAQIMELMLATVDNPSNAFEWALAEMINQPELLQRAVEELDNVVGKERLVLESDIPKLNYVKACAREAFRLHPIVPFNVPHVSMKDTIVGNYLIPKGSHVLLSRQELGRSPKVWNEPNKFIPERHLRSDGSNVVLTEPDLKFISFSTGRRGCPGIKLGTTITIMLFARLLHGFTWAAPPNMSTIKLVESKNDVLLAEPLKAVAKPRLAAKLYR. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01196 532 Gene3D Cytochrome P450 40 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Seca6g01196 532 FunFam Cytochrome P450 9 41 529 - -
Seca6g01196 532 Pfam Cytochrome P450 49 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g01196 532 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 18 531 - -
Seca6g01196 532 SUPERFAMILY Cytochrome P450 49 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01196 Seca-Chr6 47134254 47137228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01196 41 531 Cytochrome P450 AT5G05260 54.637 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01196 - K14984 gmx:100786887 776.548