Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01191 ATGGCGCGGCTCTTCCCGAAGCTGGCGCTAATCGTGACGGCACTCGCGTTCCTGTTCTCCCCCTCTCAATCCGCCGTCTTCAGCGTAGATCTAGGCTCCGAATCGCTCAAGGTGGCGGTGGTGAACCTAAAACCCGGTCAGAGCCCGATCTCGGTCGCGATCAACGAGATGTCGAAGCGGAAATCGCCGGCGCTGGTGTCGTTCCACGACGGCAATCGCCTTCTCGGCGAGGAAGCCGCGGGTCTGGCCGCTCGCTATCCCCAAAAAGTGTATTCCCAAATCAGGGACCTCATAGGGAAACCCTACGCCTCGGCAAAGAACTTTCTAGATTCAATGTACTTGCCTTTCGAAGTGAAGGAAGATTCCAGAGGCACCGTGAGTTTCGTAGTGGACGAAAACGGAACCGAGTATTCGCCCGAGGAATTGGTTGCCATGGTTTTGAGCTACGCTACGAGTTTAGCGGAATTCCACTCGAAAATTCCTATCAAAGACGCGGTGATCTCCGTGCCACCGTATTTCGGCCAAGCTGAACGGAAAGGGCTGGTTCAGGCGGCACAGTTAGCGGGGATTAATGTTCTTTCGTTGATAAACGAGCATTCTGGTGCTGCGCTTCAGTATGGGATTGATAAGGACTTCTCGAACGAGTCAAGGCATGTGATTTTCTACGACATGGGTTTCAGCAGTACCTATGCTGCGCTTGTGTATTTCTCTTCTTATAAAAGCAAAGAATATGGGAAGACGGTGTCCGTGAACCAGTTTCAGGTTAAGGATGTTCGTTGGAACCCAGAGCTGGGTGGTCAAAATATGGAATCGCGATTGCTGGAGTATTTTGCTAATGAGTTCAATGCACAAGTTGGTAATGGAATAGATGTGAGGAGATTCCCCAAGGCTATGGCTAAATTGAAGAAACAGGTCAAACGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCCATTTCAGTAGAATCTCTTCATGGTGATGTGGACTTCAGGAGCACAATAACCCGTGAAAAATTTGAAGAGCTCTGTGAAGATATTTGGGAAAAATCTCTTTTACCTGTGAAAGAGGTGCTTGAGCATTCAGGCCTATCAATGGAACAAATCTATGCAGTGGAGTTGATCGGAGGTGCTACCAGAGTGCCAAAGTTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGTGCAGCTCTGCACGCTGCGAATTTGAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGGTTGATGGTTCCTTATATGGATTTGTGGTTGAGTTGAATGGTCCTGATCTTTTGAAAGATGAAAGCTCAAGGCAGTTACTGGTACCACGAATGAAGAAACTCCCGAGTAAGATGTTCAGATCTGTTAATCATAACAAAGATTTTGAAGTTTCACTAGCTTACGAGAATGAAGATTATTTGCCACCTGGCGTTAACTCTCCTGTAATTGCTCAGTACCAGATATCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGGAATCTGTCATCCCCCATCAAGGCAAATATACATTTCTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACTGAGTGGGTGGAAGTTCCCAGGAAGAATTTGACCATAGACAATTCAACTATTTCGTCAAACATAACAGATGAATCTGGTGCTAGGAACAGTTCTGAGGAAAACAATGAAAGCATGCAAACTGATGGTGAGATTAATAAGACGACCAATGTTAGTGCAGAGGAGCAAGCTGCTGCTGAACCTGCTATGGAGAGAAAGCTGAAAAAGCGGACCTTTAGGGTACCGTTAAAGATTGTTGAGAAGATAACTGGACCTGGGATGTCTCTATCGAAAGATTTTCTAGCTGAAGCTAAAAAAAAATTGGAAGCACTAGACAAAAAGGATGCAGAAAGAAAAAGAACAGCTGAATTAAAAAATAATTTAGAAGGATATATATATACCACTAAGGAAAAGATTGAAACTCTCGAGGATTTTGAAAAAGTTTCTACCAGTGAGGAGCGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGGCAATGCTACAGAGTTTCAAGACCGACTAGATCAGTTGAAAGCTGTTGGAGATCCAATTTTCTTCAGATTAAAAGAGCTCACAGCTCGACCAGTGGCAGTTGAGCATGCCCGTAAATATATTGATGAGCTGAAACAGGTACCGTCAGCAAACTTCTGA 2304 0.447 MARLFPKLALIVTALAFLFSPSQSAVFSVDLGSESLKVAVVNLKPGQSPISVAINEMSKRKSPALVSFHDGNRLLGEEAAGLAARYPQKVYSQIRDLIGKPYASAKNFLDSMYLPFEVKEDSRGTVSFVVDENGTEYSPEELVAMVLSYATSLAEFHSKIPIKDAVISVPPYFGQAERKGLVQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGFSSTYAALVYFSSYKSKEYGKTVSVNQFQVKDVRWNPELGGQNMESRLLEYFANEFNAQVGNGIDVRRFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDVDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSGLSMEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGFVVELNGPDLLKDESSRQLLVPRMKKLPSKMFRSVNHNKDFEVSLAYENEDYLPPGVNSPVIAQYQISGLTDASEKYSSRNLSSPIKANIHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTIDNSTISSNITDESGARNSSEENNESMQTDGEINKTTNVSAEEQAAAEPAMERKLKKRTFRVPLKIVEKITGPGMSLSKDFLAEAKKKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETLEDFEKVSTSEERQSFVEKLDEVQDWLYTDGEDGNATEFQDRLDQLKAVGDPIFFRLKELTARPVAVEHARKYIDELKQVPSANF. 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01191 767 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 571 IPR029047 -
Seca6g01191 767 PRINTS 70kDa heat shock protein signature 369 385 - -
Seca6g01191 767 PRINTS 70kDa heat shock protein signature 165 185 - -
Seca6g01191 767 PRINTS 70kDa heat shock protein signature 25 38 - -
Seca6g01191 767 PRINTS 70kDa heat shock protein signature 57 69 - -
Seca6g01191 767 PRINTS 70kDa heat shock protein signature 401 421 - -
Seca6g01191 767 Pfam Hsp70 protein 27 737 IPR013126 GO:0005524|GO:0140662
Seca6g01191 767 SUPERFAMILY Actin-like ATPase domain 216 418 IPR043129 -
Seca6g01191 767 Gene3D - 637 749 IPR029048 -
Seca6g01191 767 Gene3D Actin; Chain A, domain 4 265 350 - -
Seca6g01191 767 FunFam Heat shock 70 kDa protein 17 426 572 - -
Seca6g01191 767 MobiDBLite consensus disorder prediction 566 603 - -
Seca6g01191 767 Gene3D - 29 416 - -
Seca6g01191 767 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
Seca6g01191 767 ProSitePatterns Heat shock hsp70 proteins family signature 3. 372 386 IPR018181 -
Seca6g01191 767 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 664 745 IPR029048 -
Seca6g01191 767 Gene3D - 211 398 - -
Seca6g01191 767 Gene3D - 92 145 - -
Seca6g01191 767 FunFam Heat shock 70 kDa protein 4 265 350 - -
Seca6g01191 767 FunFam Heat shock 70 kDa protein 4 637 749 - -
Seca6g01191 767 CDD HYOU1-like_NBD 28 416 - -
Seca6g01191 767 MobiDBLite consensus disorder prediction 566 610 - -
Seca6g01191 767 PANTHER HSC70CB, ISOFORM G-RELATED 24 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01191 Seca-Chr6 46315318 46324948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01191 22 739 Calmodulin-binding Proteins AT3G12580 26.639 4.05e-69 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01191 K09486 - gmx:100786898 1283.09