Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01179 ATGGGAAGTAGTGAATCTGATTGTTGTGAGCACTGTAATTCAAGATTGGCTTACTTCAAAAGGTCTACCACTCATTCTTCACCAGCAAATCGAGACAGAGCAAGGCCATCAGAATTCCAGTCATTTTCTGATTCACTAGTTTGTCTTCTCTTGGACCCAAAGGAGCGAAACAACATTGAGTACAAATTGGAGACCTTTATCGCAGTGTACAGGAAGCTGTCTGGTAAAGATGTTGTGTTTGAGTATCCCATCACAGAGGCTTAA 264 0.4167 MGSSESDCCEHCNSRLAYFKRSTTHSSPANRDRARPSEFQSFSDSLVCLLLDPKERNNIEYKLETFIAVYRKLSGKDVVFEYPITEA. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01179 87 PANTHER 40S RIBOSOMAL PROTEIN S7 49 86 IPR000554 GO:0003735|GO:0005840|GO:0006412
Seca6g01179 87 Pfam Ribosomal protein S7e 46 82 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01179 Seca-Chr6 45584671 45585474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01179 46 87 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 71.429 8.51e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01179 K02993 - nnu:104602921 76.2553