Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01177 ATGAAGGTAGTAAATCATTTGACGGGAAATTTGGACTTAACATTTCACAGCAAATCTAAGGATGATGAACTTGGAGTCCAACTTCTCCATCCTAGTGAGTCGTGGGAATGGAGTTTTAACCCTGCCAGATTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGAAAGATAATATTAGAGTCCAACCATGA 195 0.3846 MKVVNHLTGNLDLTFHSKSKDDELGVQLLHPSESWEWSFNPARFFWTTQFYCLFQWKDNIRVQP. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01177 64 PANTHER - 2 58 IPR010264 -
Seca6g01177 64 Pfam Plant self-incompatibility protein S1 2 58 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01177 Seca-Chr6 45445206 45445400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01177 3 56 Carbohydrate Esterase AT3G16970 38.889 1.14e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01177 - - lja:Lj4g3v2376310.1 73.9442