Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01168 ATGGTTGGAAGCAATGAATCAATGACAAGTGATACTCTAGAGTTACAGGAACGACAAGCTTCCGTAATCTACTTAGAAGAGGATGAGGAAATCCCCATAGAACATGGTGACGCATATTTCATTAATGAAGTAGGTGGTGGTGTATTCCTTGTTGATAATGATTGGGATGGTGAACAATCCGGAGAAGATGAACAATGGGATGAGCCTTGTACCGAAATTCCTGGTTTTGGGGATAGGGTCCCTAGATTTAGGATTGATAGTGAGGAGGATATTAAAGGGATGGACTTGAAGGCATTTAGTCCACATGAAATTGAAATGTATGACTTTGGTAGCATGGAATTGGCCTACAAGCTCTATAGTTCTTATGCAATGAGGAATGGGTTTTGTGTTAGGAAATCATCTATTGTGAGAAGCAAAAAAACAAGGGAGCCATATCAGCAAGAGTATGTTTGTAATAGAGCAGGCTTTAGACGGGATAATGGGAAAAGTGTTGAAGATATGAAACATGAGCCTAGAGTTAATTTTAGATGTGGATGTTCTGCATTATTTCGTGTTCACATTGACTTTGTGACTTCCCGATGGTATTGTACTTGGTTTGATGATGATCACAACCATGATTTGTTGGATCCAATACACTGTGGGATGCTTCCAGCACATAGGAAGATGTCTGCTAGTGAAATAATGCAGATGAATGAAATGATGAAAGTTGGTATTAGTCCCCCTCACATTTATAGGTCATTTGCTTTACAAGCCGGAGGTTATTAG 765 0.3948 MVGSNESMTSDTLELQERQASVIYLEEDEEIPIEHGDAYFINEVGGGVFLVDNDWDGEQSGEDEQWDEPCTEIPGFGDRVPRFRIDSEEDIKGMDLKAFSPHEIEMYDFGSMELAYKLYSSYAMRNGFCVRKSSIVRSKKTREPYQQEYVCNRAGFRRDNGKSVEDMKHEPRVNFRCGCSALFRVHIDFVTSRWYCTWFDDDHNHDLLDPIHCGMLPAHRKMSASEIMQMNEMMKVGISPPHIYRSFALQAGGY. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01168 254 Pfam FAR1 DNA-binding domain 118 208 IPR004330 -
Seca6g01168 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01168 Seca-Chr6 45225003 45229310 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01168 FAR1 1.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01168 - - tpra:123913749 182.57