Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01166 ATGGATACTGGGATAGAAAATATGTCAGAGGATCATGTAGAAGAATTAATTTTAGAGGATCATGTACAACAAAATATGCCAGAGGCGGAGGTTCGCAAGATAATAGATTTGTCAAGTGATGACATATGGGGTATGGAGTTTGGAAGCGAAGAAGATGCTTACAATTTCTATTTTTCATATGCCAGATGTCATGGCTTTGCTATAAGGAAAGATGATGTAGGTCGGGATGCGAAAGGCAAAGTTAGTATGCGTCAATATTTATTCAGCAAAGCTGGGTTGAGGGACAAAAAGCACTTTATGAGGGTAGATCGTAAAAAAGAACACAGGCCTTTAACTCATGTTAATTGTGAAGCTAAGTTGCGAGTTACATATGATTATAAGACTGGGAAATTTAAGGTAGTTTCATTTTTTTTGTGTCATAATCATGAGTTAACTCTGACAAAATTTGTTCATTTAATTCCTTCATATCGTGGCTTGACCGAAAGGGATAAAGCTCAAGTGGATACATTATATTCTCATGGGGTTAGGCCATGTCAAATAATGGGTTACCTATTGGATCAAAAGGGAGGTTATGTGTAA 579 0.3661 MDTGIENMSEDHVEELILEDHVQQNMPEAEVRKIIDLSSDDIWGMEFGSEEDAYNFYFSYARCHGFAIRKDDVGRDAKGKVSMRQYLFSKAGLRDKKHFMRVDRKKEHRPLTHVNCEAKLRVTYDYKTGKFKVVSFFLCHNHELTLTKFVHLIPSYRGLTERDKAQVDTLYSHGVRPCQIMGYLLDQKGGYV. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01166 192 Pfam FAR1 DNA-binding domain 55 145 IPR004330 -
Seca6g01166 192 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01166 Seca-Chr6 45194079 45194657 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01166 FAR1 2.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01166 - - ccaj:109794460 215.312