Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01153 ATGCCTTTCCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGGATTCAGGTTGATCTCTTGGAGTTCCATAAGATTTTAAGGTGCAGTTGCTGTAACAAGAGTGGCAATGCCCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCCCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAATCTTTTAGAACAATTGTTCTTCAACATACAAATAAACGGAAACAAAAATCAGAGCAGCCTCCGTTACCAAAGAAGAGAAAAGACATGAATGGATCTGGAGACCAAAATGAAGCATCAATTCAAGCACGCTTCTGCAAGGCAGTTACGGAGCTGCAGATCACAGGGCTAGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGTACAAAGAGTTGCATTTGGACTTTGA 462 0.4113 MPFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCNKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQHTNKRKQKSEQPPLPKKRKDMNGSGDQNEASIQARFCKAVTELQITGLVRMPSKRRPDFVQRVAFGL. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01153 153 CDD Orc3 2 151 - -
Seca6g01153 153 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 1 152 IPR020795 GO:0003677|GO:0005664|GO:0006260
Seca6g01153 153 MobiDBLite consensus disorder prediction 89 110 - -
Seca6g01153 153 MobiDBLite consensus disorder prediction 88 113 - -
Seca6g01153 153 Pfam Origin recognition complex winged helix C-terminal 24 151 IPR040855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01153 Seca-Chr6 44536930 44540156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01153 1 85 Core DNA Replication Machinery Family AT5G16690 68.235 1.09e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01153 K02605 - gmx:100780646 292.352