Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01139 ATGTGCGATACAAAATGGGTTATTTCTTTGAAGCCTCTTCCACACAAAGGTTTAGAAAAAGGGAATGAGGATTCATCATGTAAAATATGTAGTAGAAGGCTGGTTGGGTCTGATTCATATCGTTATTGCTCTATTACTTGCAAGGTTGAAGCTATTTTAAGGAAGCCTGATGATTCAGATGCTCCCTTCATTTCCCTCCAGAGTCTTTGTCAGATAAAGAGGGAGGAAACTACTGAACCCCCAAAGCGGCGTAACAAAAGAAAGGGAACACCCTGTAGAGCTCCTTTGTTCTGA 294 0.4116 MCDTKWVISLKPLPHKGLEKGNEDSSCKICSRRLVGSDSYRYCSITCKVEAILRKPDDSDAPFISLQSLCQIKREETTEPPKRRNKRKGTPCRAPLF. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01139 97 Pfam PLATZ transcription factor 3 49 IPR006734 -
Seca6g01139 97 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01139 Seca-Chr6 43663775 43664166 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca6g01139 PLATZ 5.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01139 - - gmx:102660256 102.834