Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01138 ATGGACAAAGTGTGTGAGCCGAAGCTGCTTGAGGATTTTCTGAGCAAAACATTTTTTTACACATGTACAACTCATTCTTTACATAGAAATGAGTTAAGCCAATACTATATAAACTGTAATCTAGTAGTTTGCAAACACTGTTCATCATCAGAAACTCACCACCAGCACCAGATACTGAAAATTTATAGATATAGTTCAAAGGAGGTTGTCCCTCTTGATGCTATGCAAAAGCACATTGACTGCTCACAAATTCAGCTCTTCATATGCAATACAATATGGGTTATTTCTTTGAAGCCTCTTCCACACAAAGGTTTAGAAAAAGGGAATGAGGATTCATCATGTAAAATTTGTAGTAGAAGGCTGGTTGGGTCTGATTCATATCGTCACTGCTCCATTACTTGCAAGTTTCTAACTATTTTGTACAAACTTTCTCAGGTTGAAGTTGTTTTAAGGAAGCCTGATGATTCAGCTGCTCCCTTCCTTTCCCTCCAAAGTCTTTGTCAGATAAAAAGGGAGGAAACTACTGAACCCCCAATGCAGCGTAACAAAAGAAAGGGAACACCCTGTAGAGCTCCTTTGTTCTGA 585 0.3846 MDKVCEPKLLEDFLSKTFFYTCTTHSLHRNELSQYYINCNLVVCKHCSSSETHHQHQILKIYRYSSKEVVPLDAMQKHIDCSQIQLFICNTIWVISLKPLPHKGLEKGNEDSSCKICSRRLVGSDSYRHCSITCKFLTILYKLSQVEVVLRKPDDSAAPFLSLQSLCQIKREETTEPPMQRNKRKGTPCRAPLF. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01138 194 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 193 - -
Seca6g01138 194 MobiDBLite consensus disorder prediction 174 194 - -
Seca6g01138 194 Pfam PLATZ transcription factor 63 135 IPR006734 -
Seca6g01138 194 ProSiteProfiles Zinc finger B-box type profile. 22 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01138 Seca-Chr6 43595041 43596472 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca6g01138 PLATZ 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01138 - - rcu:8280450 178.333