Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01132 ATGAGTGGTTCTTGTGATCGGGATGAAGAAGTGGATCCATTCAAGGTTGATGAAGGTTTTGATTTAGGTAGTGTTGATTTCAACAATTTAACTCTGGCTGACATTAATATGTTCCACTTTAGTAGTTGTGATGTTGCGTTTAAGTTTTACAACAAGTATGCATTTAAATGGGGGTTTGCAGCTCGTAAGTGGAATGTGGTTAAGAACAAAAAAGGTGAGGTCACACAACAGACCTTTGTTTGTTTCAAGGAGGGGTTCCGTTTAAAGAAGCATTTGCAGAGACAAAACCGCAAGAGGGAACCTAGACCGATGACAAGGTGTGGATGTTCAACTTTTTTTCGTGTTCGGTATGTTGGAGGGACTTCTCCTTGGCATGTTAAGGAGTTTTGTGATGATCATACTCATGAGTTGTTAGATGAGAAGTATGTTGGAATGTTGCTTGCACATAGGAAGATGCATGATTGTGATGTGATGCAGATGAATAGCATGATGGATGCTGGTATTGGTGTAACTCAAATATATGGGTTAGCTGCAAACCAGTCAGGTGGGTATGAAAGGCTAGGGTTTAGGAAAAGAGACATGTATAATGAGATTGAAAAGCAGAGGCGCATCTTGGTTAGTGATGTAAGAGCTGCATTTGCGTATCTAAGAAAGTTCCATTCAAATGATAATGCATTATTTTGGAGACACACTGTTGATGCTGAAGGAAGGCTCGAACACTTATTTTGGTGTGATAGTAGGAGTCAAGCAGATTACCTGCTTTTCGGAGATATTGTTGCGTTTGATGCGACCTATAAAAGAAATAGATATATGTCTCCGATGGTGGTATTTGCTGGAGTCAACCATCACAACCAGACCATTGTGTTTGAAAGTGGGTTAATTGAAAATGAAACTGAAGAGACCTATGTTTGGTTGTTAAAACAATTTGTTGAAGCCATGAAGGGTAAGTTACCATCATCTGTAATCACCGATGGTGATCTTGCAATGAGGAATGCTATTAAATCTATATTTATAGGTTCCCACCATAGATTGTGCGCTTGA 1041 0.3939 MSGSCDRDEEVDPFKVDEGFDLGSVDFNNLTLADINMFHFSSCDVAFKFYNKYAFKWGFAARKWNVVKNKKGEVTQQTFVCFKEGFRLKKHLQRQNRKREPRPMTRCGCSTFFRVRYVGGTSPWHVKEFCDDHTHELLDEKYVGMLLAHRKMHDCDVMQMNSMMDAGIGVTQIYGLAANQSGGYERLGFRKRDMYNEIEKQRRILVSDVRAAFAYLRKFHSNDNALFWRHTVDAEGRLEHLFWCDSRSQADYLLFGDIVAFDATYKRNRYMSPMVVFAGVNHHNQTIVFESGLIENETEETYVWLLKQFVEAMKGKLPSSVITDGDLAMRNAIKSIFIGSHHRLCA. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01132 346 Pfam FAR1 DNA-binding domain 48 138 IPR004330 -
Seca6g01132 346 Pfam MULE transposase domain 258 345 IPR018289 -
Seca6g01132 346 PANTHER OS01G0519700 PROTEIN 39 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01132 Seca-Chr6 43401839 43402879 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01132 FAR1 7.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01132 - - mtr:112420123 373.629