Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01121 ATGGCGGAGAAAGGAAGTGTGAGTTTAGAAGGAGAGAAGGTGATATTGGTCCCATACATGGAGGCACACGTCCCTAAGTATCATGAGTGGATGCAAGACCCATCTCTTCTTGAAGCCACTGGCTCTGAGCCCCTTACCCTTGAGCAGGAGTACCAGATGCAACTCTCCTGGTCTCGTGACCTTAACAAGGAGACGTTTATTGTGTTGAATAAGGACTTCGTTCATGGAGATTTCTTACATGGGGAACCCCATATTGAAGCCATGGTTGGTGATGTAAACATTTTCATGAATGACGTGAACAATCCTCACATGGCAGAGGTTGAAATAATGATAGCTGAACAAAAGAGCCGTGGAAAAGGACTTGGAAAGGAGTCCGTTCTGATGATGATGGCCTTTGCTATTGAGAAGTTACAGATCAATATCTTTCGGGTTAAAATTGGAGAATCCAATGTAGCATCCCTTAATCTGTTCAGAAAATTGGTTTGTCTGCTGCTTCTCTATCTTTCCCTTCATATTAAAGGCATGATGTGTCTTACCACCATGCATTTAACTTATTCTGAGTTGTTGTTAGGGTTTAGGTTTTATGCTTTTGGTTGA 597 0.4238 MAEKGSVSLEGEKVILVPYMEAHVPKYHEWMQDPSLLEATGSEPLTLEQEYQMQLSWSRDLNKETFIVLNKDFVHGDFLHGEPHIEAMVGDVNIFMNDVNNPHMAEVEIMIAEQKSRGKGLGKESVLMMMAFAIEKLQINIFRVKIGESNVASLNLFRKLVCLLLLYLSLHIKGMMCLTTMHLTYSELLLGFRFYAFG. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01121 198 Gene3D - 4 161 - -
Seca6g01121 198 PANTHER N-ACETYLTRANSFERASE 9 1 160 IPR039135 GO:0008080
Seca6g01121 198 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 3 167 - -
Seca6g01121 198 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 160 IPR016181 -
Seca6g01121 198 Pfam Acetyltransferase (GNAT) domain 14 160 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01121 Seca-Chr6 42942630 42945157 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca6g01121 Acetyltransf_3 2e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01121 K25762 - gmx:100817900 257.684