Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01101 ATGGAAGGGCAGGGGAAGAAACTACTTGTACGCACACACATTTTGTGCCTCCTTTTGCTTCAGTGGCTTACAAGAATTGGTGCGAAGGTTCCGGCGATCATCGTGTTCGGTGACTCCTCCGTGGACGCCGGGAATAACAATTACATAGAGACGGTTGCTCGGAGCAATTTCGAGCCATACGGACGTGACTTTGTGGGTGGGAAGGCAACTGGGAGATTCAGCAATGGGCGAATAGCAACAGATTTCATATCTGAAGCGTTTAGAATCAAGGCATATGTGCCTGCATACTTGGATCCTAGTTATAACATCTCACACTTTGTCACTGGGTTCACTTTTGCTTCTGCTGCTACTGGTTACGACAATGCCACTTCTGATGTGCTGCAGTCTGTGATACCATTATGGAAGCAGTTGGAGTACTACAAGGGATACCAAAAGAAAATGAGTGCCTGTGTTGGAGAAAGAAGAGCGAATGAGACCATTGGCAAAGCATTGCATATAATAAGTCTAGGAACAAATGACTTCCTAGAGAACTATTATGCAATCCCTGGCAGGGCATCTCAATACACACCAAGAGAATATGAGAATTTTCTGGCTGGGATAGCTGAGAAATTCATCCACAAACTCTATGGTCTTGGTGCTAGGAAGATATCCCTAGGAGGTTTACCTCCCATGGGGTGCTTGCCGTTGGAGAGAACCACAAATTTTGTTGGTGGAAATGACTGTGTTCCTACTTACAATAACATTGCAATGGAGTTCAATGATAAACTCAACAAGTTGACCACAAAGCTGAAGAAGGACCTTCCTGGGATAAGATTGGTATTTTCAAATCCGTATGATATTTTGTTGCATATTGTTAAAAAGCCTGCCCAATATGGGTTTCAAGTGACCTCGATAGCATGTTGTGCTACTGGAACGTTTGAGATGGGATACGCATGCAGAAGGGCCAGTCTTTTCAGTTGCATGGATGCTTCTAAATATGTATTTTGGGACTCATTCCATCCAACGGAGAAAACCAATGGAATCATTGCAAACTACCTGGTGAAGAACTCATTAGCTCAGTTTTTGCATTAA 1071 0.436 MEGQGKKLLVRTHILCLLLLQWLTRIGAKVPAIIVFGDSSVDAGNNNYIETVARSNFEPYGRDFVGGKATGRFSNGRIATDFISEAFRIKAYVPAYLDPSYNISHFVTGFTFASAATGYDNATSDVLQSVIPLWKQLEYYKGYQKKMSACVGERRANETIGKALHIISLGTNDFLENYYAIPGRASQYTPREYENFLAGIAEKFIHKLYGLGARKISLGGLPPMGCLPLERTTNFVGGNDCVPTYNNIAMEFNDKLNKLTTKLKKDLPGIRLVFSNPYDILLHIVKKPAQYGFQVTSIACCATGTFEMGYACRRASLFSCMDASKYVFWDSFHPTEKTNGIIANYLVKNSLAQFLH. 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01101 356 PANTHER GDSL ESTERASE/LIPASE EXL3 20 346 - -
Seca6g01101 356 Pfam GDSL-like Lipase/Acylhydrolase 33 346 IPR001087 GO:0016788
Seca6g01101 356 CDD SGNH_plant_lipase_like 31 350 IPR035669 -
Seca6g01101 356 Gene3D SGNH hydrolase 25 352 IPR036514 -
Seca6g01101 356 SUPERFAMILY SGNH hydrolase 163 347 - -
Seca6g01101 356 FunFam GDSL esterase/lipase APG 24 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01101 Seca-Chr6 42212027 42215940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01101 26 352 Pollen Coat Proteome AT1G75910 35.821 3.11e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01101 - - gmx:100820032 592.423