Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01098 ATGCGACAATTCTTATGTAGTAGGGCTGGTAAAAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGACTGGGAAATATAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGAATTGACCCCTGCTAAATTTGTTCCTTTAATTCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCATGTTAG 291 0.3918 MRQFLCSRAGKRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKYKVVSFLDSHNHELTPAKFVPLIPAYRGLSDGDKAQVDALHSHGVRPC. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01098 96 Pfam FAR1 DNA-binding domain 2 64 IPR004330 -
Seca6g01098 96 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01098 Seca-Chr6 41784702 41784992 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01098 FAR1 6.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01098 - - ccaj:109794460 137.502