Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01094 ATGTTCAGAGACACCATGCTCAGGCTCCATAGCAGCGGATTCAACATACTAGCCCTCTCCATGAAGGTGAAGTACGCAGAGCTCATCACTCTCAACAACATGATTGCGTTTGTTGTTAATGGCTTTTCCATCTTCTCAGGTCCTCACTCGTATATGAGTAATGTTCAATTCCATATTGTGCAACATCTGTTTGATATAAAGCTTGAAAGGAATGTCCATAAACTGTTTGATGAAATGCCTGATAGGGATGTGCAGACACTATTTGCTGAAATGCCTAAAACTATTTTTGCACCGTTTCAAATTGCTTCTCACCTTCCATTTGATGGAATGGTTGCAGCAATTATGCCTCGTTCTGTCATGACCTTTGCAGACTATGGTAAATTCATAATGGTTTTGCACCGAGATCTAAAACCAAGCAATTTAATTCTTAATTATTCAGAATATACTGCAGCTATTGATATATGGTCGGTTGGTTGCATTTTGATGGAAATAATTAGTTGGGATCTTTTGTTTCTTGGTAAAGATCATTATGTTCAGCAGCTGGTATTCATAACTGAGTTACTAGTAGGTATAGCCATCGTTACAGGTCTAGCTTTGACGGTTACTACATGTCTCTGGTGGCCATTTTAA 630 0.3873 MFRDTMLRLHSSGFNILALSMKVKYAELITLNNMIAFVVNGFSIFSGPHSYMSNVQFHIVQHLFDIKLERNVHKLFDEMPDRDVQTLFAEMPKTIFAPFQIASHLPFDGMVAAIMPRSVMTFADYGKFIMVLHRDLKPSNLILNYSEYTAAIDIWSVGCILMEIISWDLLFLGKDHYVQQLVFITELLVGIAIVTGLALTVTTCLWWPF. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01094 209 PANTHER OS02G0491300 PROTEIN-RELATED 1 69 - -
Seca6g01094 209 SUPERFAMILY Protein kinase-like (PK-like) 106 187 IPR011009 -
Seca6g01094 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Seca6g01094 209 Gene3D Transferase(Phosphotransferase) domain 1 141 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01094 Seca-Chr6 41724453 41725082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01094 131 188 MAP Kinase Gene Family AT1G07880 46.392 1.75e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01094 - K04371 gmx:100793476 89.3521