Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01070 ATGTGCAAGATGATCATATTGCAATTGCTCATGGATTGGCTTAATTATATTCATTATGACTGTGATCCTGTCATAGTGCACCGAGACATCAAAACAAGCAACATACTTCTAGAGTCTGAAATGGAGCCTCATATTTCATATTGTGGTGATGCTAAGCTTTTGGATCGAGCTTCTACCCCAACATGA 186 0.3871 MCKMIILQLLMDWLNYIHYDCDPVIVHRDIKTSNILLESEMEPHISYCGDAKLLDRASTPT. 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01070 61 PANTHER LEUCINE RICH REPEAT KINASE 2 6 58 - -
Seca6g01070 61 Gene3D Transferase(Phosphotransferase) domain 1 2 61 - -
Seca6g01070 61 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Seca6g01070 61 ProSiteProfiles Protein kinase domain profile. 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g01070 61 SUPERFAMILY Protein kinase-like (PK-like) 14 58 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01070 Seca-Chr6 41253481 41253666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01070 14 61 Receptor kinase-like Gene Family AT1G73080 58.333 3.89e-15 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Seca6g01070 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01070 - - gmx:100802056 80.1073