Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01069 ATGAGGACAGAATCTAATAGGAAGAGTGATGGTGTCGAACCCGAAAAATCTAATTCACCTCCTAAACATAATGCTGATTCTGATGAGATTGCTGATGGTTATAAAAAGATATTTGAACTTACAGATGAGGATATCAGAGCTCTTGAGTTTGATTCTGAAGAAGATGGATATGTTTTCTACCGTGAGTATGCAAAATTCATAGGGTTTGCTGTTAGGAAACATGATGTGTATAGAGATCGTAATGATGTAATGACAATGAGACAATTTGTATGTAACAAGGAGGGAGAGAGAAGTGGCAAGCACCTTAATAGGACTGATAGAAAGAGGGAGGAAAAGGCCATTACACGAACAAAATGTAATGCAAGGCTCCGAATTCATTTAGATTATAAGAGTAGAAAGTGGATTGTTGGTTGTTTTGAGCCAACCCATAACCATGAATTGACTCCTGCTAGTATGGTTCATTTGATGCCAGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACAGGTTGACGATCTACATCATTACGGTGTTAGGACTTGCCATATTATTGGGCTTATAATGGGCCAGAAGGGGGTTATTCTGATCTTGGATTCTGTAAGAAGGATTTGTACAATCACATTGATAAGGTGA 633 0.387 MRTESNRKSDGVEPEKSNSPPKHNADSDEIADGYKKIFELTDEDIRALEFDSEEDGYVFYREYAKFIGFAVRKHDVYRDRNDVMTMRQFVCNKEGERSGKHLNRTDRKREEKAITRTKCNARLRIHLDYKSRKWIVGCFEPTHNHELTPASMVHLMPAYRGLSVADKAQVDDLHHYGVRTCHIIGLIMGQKGVILILDSVRRICTITLIR. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01069 210 MobiDBLite consensus disorder prediction 1 29 - -
Seca6g01069 210 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
Seca6g01069 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01069 Seca-Chr6 41174442 41175074 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g01069 FAR1 2.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01069 - - ccaj:109792835 203.756