Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01057 ATGGCATTTGAAGAACATGGCTTCACTGAGGAAGTGTTGAATATAGTTTCAAAGTTTTTCAATGGTACCATTTTAGAAACTCAGTGTGAAAAGCAGAAAGTATGGTATGAACCTGAAGGTGACAGGAAACCATCTTGTGATAATTGTTACCTTCGGAAACCTCTGAAAGCGCAAGTTGATGGGAAGCTAAGTTTCTTAAATTGGAAACATCTGGAAAAAGATTTATATCTGAAGGGAGTAGAAATATTTGGGAGGAACAGCTTGAAGACCTTCATGGAAGTAGCTAGCTACATGTATGCTGGAGAAGTGTCAGTACCTGATAGTTCAATCATGAACAAAAATGGACAAATTGATGCAGAGTGCGAAGAATTACTATTGAGAAATGTGAAACTTACAAGCAGTATACGCCTTGTGGATGTCAGAAAATGTGTGGGAAGCAATGTCCTTGTCTTCATAATGGATCTTGTTGTGAAAAATATTGTGGGTGTTCAAAGTTATGCAAAAATCGGTTTAGAGGATGTTATTGTGCTACGAGTCAATGTAGAAGTCAACAATGTCCATGCTTTGCAGCAGAACGAGAATGTGACCCATATGTATGTCGAAATTTCTGGGTTAGGTATTTGCGGCGGTGGTTCATTAGGAGAACCACCTCGCCATGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAAAATCAAAGGATTCTATTAGCAATGTCTAATGTTGAAGGATGGGGAGCCTTCTTAAAGAACCCAGCTAACAAAAATGATTACTTGGGAGAGCTCACGGGTGAACTGATCTCTCATTTAGAAGCAGAAAAGTGTCGAAAAATGTATGATCGTGCAAACTCCTCTTTCCTTTTTAACTTGAATGATCAGGCAAGTCTCTCTATAATGTACGTTGTTGATGCTTATCGCAAGGGAGACAAGCTGAAATTTGCTAACCACTCAGAAAAGCCCAACTGTTATGCAAGGATTATGCTTGTTGGAGGGGATCATCGAGTAGGGATATTTGCCAAGGAACGCATTGAAGCTGGTGAGGAGCTTTTCTATGATTATTGCTACAGTCCAGAGCAAGAACCACCATGGTTTTAA 1101 0.3969 MAFEEHGFTEEVLNIVSKFFNGTILETQCEKQKVWYEPEGDRKPSCDNCYLRKPLKAQVDGKLSFLNWKHLEKDLYLKGVEIFGRNSLKTFMEVASYMYAGEVSVPDSSIMNKNGQIDAECEELLLRNVKLTSSIRLVDVRKCVGSNVLVFIMDLVVKNIVGVQSYAKIGLEDVIVLRVNVEVNNVHALQQNENVTHMYVEISGLGICGGGSLGEPPRHGDGQCGNMRLLLRQNQRILLAMSNVEGWGAFLKNPANKNDYLGELTGELISHLEAEKCRKMYDRANSSFLFNLNDQASLSIMYVVDAYRKGDKLKFANHSEKPNCYARIMLVGGDHRVGIFAKERIEAGEELFYDYCYSPEQEPPWF. 367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01057 366 SUPERFAMILY SET domain 200 359 IPR046341 -
Seca6g01057 366 SMART set_7 235 362 IPR001214 GO:0005515
Seca6g01057 366 Gene3D SET domain 184 358 IPR046341 -
Seca6g01057 366 ProSiteProfiles SET domain profile. 235 356 IPR001214 GO:0005515
Seca6g01057 366 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 216 359 IPR045318 GO:0006338|GO:0042054
Seca6g01057 366 CDD SET_EZH 235 357 - -
Seca6g01057 366 Pfam SET domain 280 355 IPR001214 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca6g01057 Seca-Chr6 40398664 40401701 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01057 245 362 C2H2 Transcription Factor Family AT2G23740 30.303 4.94e-08 53.1
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca6g01057 SET 3.9e-11 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01057 - - pavi:110749358 250.751