Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01035 ATGGTTACTCATGATGAAGACACAGAAAGTTACTTCCACAACACTAGTGTGCATTGTGTATTGTGCCCTCGCAAACCTGATAATGGGCAAGGCATTGTGGAAGGAATTGAGGTTGCCACCATGTTTGCACATCATCAGAAGATTGTAGTTGTCGATGGTGAGGTGCCTAGTAGGAAAGTAAACAGAAGTAGAAGAATTTTGAGTTTCATTGGTGGTATTGATCTCTGTGATGGAAGATATGACACCCCTTTGCATTCCATTTTCAGGACCCTTGGGACTGTTCATCATGATGATTTTCACCAACCAAATTTCAAAGGTTCTTCTATTGCTAAAGGTGGACCAAGAGAGCCTTGGCATGACATACATTGCCTCATGGAAGGACCAATTGCTTGGGATGTTCTGAAGAATTTTGAGCAGAGGTGGAAGAAGCAAGGTAGGCAGAATGTTTCACCTGTTGAGCTTGATGTACTTGCTGATATCTTCATACCTTCATCTAAAATAATGTTTCCTGAAGACAAAGAAACATGGAATGTTCAGTTGTTTAGATCCATTGATGGAGGAGCTGCTTATGGCCTCCCAAATACACATGAGGGTGCAGCTAGAGCCAGTTATGGTCTTCTGAATGGGAAAGAACATGTCATTGACAGAAGCATTCAGAATGCTTATATTAATGCTATTAGGAGAGCTAAAAACTTTATCTATATAGAAAACCAATATTTCCTTGGAAGCTCTTTTTGTTGGAATTCAGATGATCACAACCACCATGTTGGGAAGGTTGGAGCTTTGCATCTGATTCCCAAGGAACTATCTCTAAAAGTTGTTAGCAAGATTGAAGCAGGAGAGAGATTCACTGTCTATATAGTGATTCCAATGTGGCCAGAGGGCATTCCTGAAAGTGATGCTGTTCAGAGCATTCTGAATTGGCAAAAAAAGACATTGGATATGATGTATACTGATATAGTTCAAGCTCTACAAAGAAAAGGTATTAAGGTTGACCCGAAAGACTATTTGAGTTTCTTTTGCCTTGGAAATCGAGAGAAGAAGAAAAATGGAGAATATGAACCTTCTAGAAAGCCAAATGAAGAATCAGATTACAGCAGAGCTCAACAAGCAAGGCGTTTCATAATCTATGTCCATGCCAAAATGATGATAGTTGATGATGAATACATAATTATTGGATCTGCTAACATCAATGAGAGGTCAATGAATGGGGCTAGGGATACAGAGATTGCCATGGGAGGCTACCAACCACATCACATAGCTACAGAGGAGCCAGCAAGGGGTCAGATACATGGCTTGAGAATGGCATTGTGGTATGAGCACTTGGGATTTGTGGATGAATCCTTTCTTACTCCACAGAGTTTGGAATGTGTCAGGAAAATAAACCAAAGTTCTGAAAGGTACTGGGAACTCTATTGCAGTGAGACACTTGATGATGACTTGCCTGGACATCTACTTAGTTATCCCATTACAGTCACAGAAAGTGGAGAGATCACAACCAAACCGGGTGTGGAGTATTTTCCAGACACCAAGGCACGAATATTAGGGTCCAATTCTGGACTTCCAACAATCCTAACTACTTAA 1584 0.4072 MVTHDEDTESYFHNTSVHCVLCPRKPDNGQGIVEGIEVATMFAHHQKIVVVDGEVPSRKVNRSRRILSFIGGIDLCDGRYDTPLHSIFRTLGTVHHDDFHQPNFKGSSIAKGGPREPWHDIHCLMEGPIAWDVLKNFEQRWKKQGRQNVSPVELDVLADIFIPSSKIMFPEDKETWNVQLFRSIDGGAAYGLPNTHEGAARASYGLLNGKEHVIDRSIQNAYINAIRRAKNFIYIENQYFLGSSFCWNSDDHNHHVGKVGALHLIPKELSLKVVSKIEAGERFTVYIVIPMWPEGIPESDAVQSILNWQKKTLDMMYTDIVQALQRKGIKVDPKDYLSFFCLGNREKKKNGEYEPSRKPNEESDYSRAQQARRFIIYVHAKMMIVDDEYIIIGSANINERSMNGARDTEIAMGGYQPHHIATEEPARGQIHGLRMALWYEHLGFVDESFLTPQSLECVRKINQSSERYWELYCSETLDDDLPGHLLSYPITVTESGEITTKPGVEYFPDTKARILGSNSGLPTILTT. 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01035 527 PANTHER PHOSPHOLIPASE D 1 518 IPR015679 -
Seca6g01035 527 SUPERFAMILY Phospholipase D/nuclease 4 154 - -
Seca6g01035 527 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 40 79 IPR001736 GO:0003824
Seca6g01035 527 Pfam Phospholipase D Active site motif 376 401 IPR001736 GO:0003824
Seca6g01035 527 Pfam Phospholipase D Active site motif 40 79 IPR001736 GO:0003824
Seca6g01035 527 Gene3D Endonuclease Chain A 15 159 - -
Seca6g01035 527 SUPERFAMILY Phospholipase D/nuclease 218 458 - -
Seca6g01035 527 Pfam Phospholipase D C terminal 446 517 IPR024632 -
Seca6g01035 527 Gene3D Endonuclease Chain A 194 423 - -
Seca6g01035 527 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 374 401 IPR001736 GO:0003824
Seca6g01035 527 SMART pld_4 40 79 IPR001736 GO:0003824
Seca6g01035 527 SMART pld_4 374 401 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01035 Seca-Chr6 38433189 38435458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01035 1 527 Phospholipase D Gene Family (Wang group) AT3G15730 67.045 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01035 K01115 - qsu:111988169 813.913