Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00997 ATGGTTTTTGTTTTGAAAATTGTTTTATATCTCTCTATGCTGGTAACTATACTAGTTACTTTGCAGTTCAATGGTGGTAATGCAGGGCTACTACCTGGCAAAGTAACTGTTGAAATAACCAATAATTTAAGTGATTATCAGTTGGGTGTTCATTGTAAAGACAAGAATCATGATCTTGGCTATCAAGTTCTGCCCATTGGAGAAAGTTACAGTTTCAAAGTTTCTCCTAATATTTTCATAAATAATACGTTGTACTTTTGCCGATTTAACTGGATAACAGAAGCACACTGGTTTGACATTTATGATCAAGACCGAGATGATTGTGATAAGTTATGTCATTGGGATATAGTGGCAACAGGACCATGTAAGGTTAAGGAGAAGTCTCTGGAATGCTTTCACTGGAATAAAGACATAAAGGTAGCTTGA 426 0.3521 MVFVLKIVLYLSMLVTILVTLQFNGGNAGLLPGKVTVEITNNLSDYQLGVHCKDKNHDLGYQVLPIGESYSFKVSPNIFINNTLYFCRFNWITEAHWFDIYDQDRDDCDKLCHWDIVATGPCKVKEKSLECFHWNKDIKVA. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00997 141 PANTHER - 33 125 IPR010264 -
Seca6g00997 141 Pfam Plant self-incompatibility protein S1 36 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00997 Seca-Chr6 36299615 36300040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00997 28 135 Carbohydrate Esterase AT3G16970 39.831 3.06e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00997 - - pvu:PHAVU_004G003100g 140.969