Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00995 ATGGATTTTGTTTCGAAAATTGTTTTATATCTCTCTATGCTGGTAACTATACTAGTTACTTTGCATTTCAATGGTGGTAACGCAGGGCTACTACTTGGCAAAGTAACTGTTGAAATAACCAATAATTTAAGTGATTATCAGTTGGGTGTTCATTGCAAAGACAAGAATCATGATCTTGGCTTTCAAGTTCTGCCCATCGGAGGAAGCTACAGCTTCAAAGTTTCTCCTAATCTTTTCCTAAATAATACGTTGTACTTTTGCCAGTTTAACTGGATAACAGAAGCACACTGGTTTAACATTTATGATCAAGAACGAGATGATTGTGATAACACATGTCATTGGGATATAGTGGCAACAGGACCATGTAAGGTTATGAAGGAGTCTCTGGATTGCTTTCACTGGAATAACGCCATAAAGGCAACTTGA 426 0.3709 MDFVSKIVLYLSMLVTILVTLHFNGGNAGLLLGKVTVEITNNLSDYQLGVHCKDKNHDLGFQVLPIGGSYSFKVSPNLFLNNTLYFCQFNWITEAHWFNIYDQERDDCDNTCHWDIVATGPCKVMKESLDCFHWNNAIKAT. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00995 141 PANTHER - 33 124 IPR010264 -
Seca6g00995 141 Pfam Plant self-incompatibility protein S1 36 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00995 Seca-Chr6 36269889 36270314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00995 28 136 Carbohydrate Esterase AT3G16970 41.176 1.09e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00995 - - cam:101507265 132.494