Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00964 ATGGGAACCTCTGCAAACGCCGCCGCCGGTGGCCGTAGCAACACCCTCCACAAAGACGTTGACTATGCTCAATACTTCTGCACCTACGCTTTCCTTTACCACCAGAAGGAGATGCTCTCCGATCGGGTTCGCATGGACGCTTACTTCAATGCCATTTTTGAGAACAAACATCACTTCAACGGCAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGGAAAGTGTATGCAGTGGAAGCTACCAAGATGTCAGAACACGCACGTGCACTTGTCAAAGCAAATAATCTCCAGCACGTGGTTGAAGTCATTGAGGGTTCAATGGAGGATGTTACCTTGCCAGAGAAAGTTGATGTCATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATATTTGCTCGTGACCACTGGCTCAAACCAACAGGAGTCATGTATCCTAGCCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATTGTAGATCACAAAATGGGGGATTACGAGTCTGCTATGGATGATTGGCACCACTTTGTCGATGAAACAAAGACCTACTATGGTGTTGATATGAGCACTTTAACGAAGCCCTTTTCAGAGGAGCAGAGGAAATACTATCTACAGGCAAGTTGTATTAGTTTATGTAATGATATAGTTTCAGTTAAAACATCAATGTGGAACAACCTTCATCCTCATCAAGTCATAGGAACTGCTGCTGTAATAAAGGAAATTGACTGTTTAACTGCCACAGTGACTGACATAGAGAAAGTCAGGTCAAAGTTTTCTTTGTCAATAACCATCGAAAACATGAAGTTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTTAGGGGAAGAAACGAGGATCCAGCTGAACATGAGATTGAGTTAACTACTGCTCCCAGTGTAGATTTTGGTACACACTGGGGCCAACAGGTTTTTCTATTGCACCCTCCTACACATGTGAGTAAAGGTGATAATTTAAATGTTTCTTTCCTGATGAGCCGCTCAAAGGAAAACCATCGGTTGATGGAGGTTGAGCTTGGGTGTGAGATTCAACAGCATTCTGGCAAGCTTCTTGCCCCTTCCAAAAATAAGTACTACATTGAATGA 1164 0.4373 MGTSANAAAGGRSNTLHKDVDYAQYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKHHFNGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQHVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIFARDHWLKPTGVMYPSHARMWMAPIRTGIVDHKMGDYESAMDDWHHFVDETKTYYGVDMSTLTKPFSEEQRKYYLQASCISLCNDIVSVKTSMWNNLHPHQVIGTAAVIKEIDCLTATVTDIEKVRSKFSLSITIENMKLCGFGGWFDVHFRGRNEDPAEHEIELTTAPSVDFGTHWGQQVFLLHPPTHVSKGDNLNVSFLMSRSKENHRLMEVELGCEIQQHSGKLLAPSKNKYYIE. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00964 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 370 IPR029063 -
Seca6g00964 387 CDD AdoMet_MTases 63 163 - -
Seca6g00964 387 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 364 IPR025799 GO:0016274|GO:0018216
Seca6g00964 387 Gene3D - 166 387 - -
Seca6g00964 387 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Seca6g00964 387 FunFam Protein arginine N-methyltransferase PRMT10 166 387 - -
Seca6g00964 387 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
Seca6g00964 387 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Seca6g00964 387 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 371 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00964 Seca-Chr6 34385322 34393257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00964 24 346 C2H2 Transcription Factor Family AT3G12270 32.544 1.22e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00964 K11434 - gmx:100795134 683.715