Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00963 ATGAAACTCAAACACATGGAGGAGCTTTTGTCATGGTTTAAGATTCTTTTTGTCTTTCTCATTACTCTGGCATTTGTGATCAAGTTTGCAGTGTTGCTCTGGTGGAGACCCAGAAATATTGAACTACATTTCTCCAAACAGGGAATCAAGGGACCCCCATATCGTTTCTTCATTGGAAATGTAAAAGAAATTGTGGGGTTGATGTCGAAGGCTTCCTCTCAACCTATGCCTTTTTCTCATAACATTCTCCCTAGAGTCCTTTCTTTCTACCATCACTGGAAGAAAATTTACGGTGCAACATTCCTTGTTTGGTTTGGACCCACCGTTCGAGTCACCATCTCTGATCCAGAGCTCATCCGGGAAATCTTCACCTCCAAGTCAAAATTTTATGAGAAAAGCGAAGCTCCCCAACTTATCAGAGAGGTAGAAGGTGATGGACTATTTAGCCTCAAAGGACAAAAATGGGCTCACCACAGAAGAATCATCTCCCCAACTTTTCTCATGGAAAATCTCAAAATGTTGATACCGATGATGGGAACAAGCGTGGTTGAGATGCTGGAAAAGTGGAGGGCAATGGCCGAGAAAGAAAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAAACCCTAACAGAAGATGTTATTACTATGACAGCATTCGGAAATAGCTACGAAGATGGCAAACCCATTTTCCAGCTACAATCCCAACAAATGCTCTTAGCAGCTGATGCATTCAATAAAGGCTTCATCCCAGGATATAGATTTTTTCCGACGAGGAGGAATATAAAGTCTTGGAAATTGGGGAAGGAAATTAGGAAATCACTGGTGAAGCTCATCAATCGACGGAAAGAGAATTTGTGTAATGTGAAGAAAGGACACAAGGATTTGCTGGGGCTCATGATTCAGGCTTCTACCTCCAAGTCTAACACCTTCAAAGTCACGGTGGATGATATCGTGGAAGAGTGCAAGACCTTTTTCTTTGCTGGCAAACACACCACCTCAAACTTGCTGACGTGGACCACCATTCTCCTTGCTATGCACCAACAGTGGCAGGTAAAAGCACGTGAGGAGCTTCTCAGTGTGTGTGGAGCACGTGACATTCCCACCAAGGACGACCTCGCAAAGCTCAAGACGTTGATGATGATCGTGAACGAGTCCTTGAGACTGTACCCTCCAACAATAGCAACAATAAGAAGAGCAAAATGTGATGTTGAGCTAGGAGGTACCTATAAGATCCCATGTGGGACCGAACTCTTGATTCCCATACTGGCAGTTCATCACGATAAGGCCACGTGGGGAAGCGATGCAAACAAGTTCAATCCTGCTCGTTTCTCTGAGGGTGTGTCCCGCGCTGCGAAGCACCCTTTCGCGTTCATACCGTTCGGTCTTGGTGTGCGCACTTGCATTGGTCAAAACCTTGCGGTTCTTCAAACTAAATTGGCACTTGCAATCATGTTGCACCGTTTCACCTTCAGGTTGGCCCCGAGCTATCAGCACGCACCAACGGTTCTCATGCTGCTTTATCCTCAGTTTGGTGCGCCCATCATTTTCAAACCTATCTCTACAACCACAACGGATTAA 1584 0.452 MKLKHMEELLSWFKILFVFLITLAFVIKFAVLLWWRPRNIELHFSKQGIKGPPYRFFIGNVKEIVGLMSKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRVTISDPELIREIFTSKSKFYEKSEAPQLIREVEGDGLFSLKGQKWAHHRRIISPTFLMENLKMLIPMMGTSVVEMLEKWRAMAEKEKGEVEIEVSEWFQTLTEDVITMTAFGNSYEDGKPIFQLQSQQMLLAADAFNKGFIPGYRFFPTRRNIKSWKLGKEIRKSLVKLINRRKENLCNVKKGHKDLLGLMIQASTSKSNTFKVTVDDIVEECKTFFFAGKHTTSNLLTWTTILLAMHQQWQVKAREELLSVCGARDIPTKDDLAKLKTLMMIVNESLRLYPPTIATIRRAKCDVELGGTYKIPCGTELLIPILAVHHDKATWGSDANKFNPARFSEGVSRAAKHPFAFIPFGLGVRTCIGQNLAVLQTKLALAIMLHRFTFRLAPSYQHAPTVLMLLYPQFGAPIIFKPISTTTTD. 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00963 527 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Seca6g00963 527 Gene3D Cytochrome P450 34 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 CDD CYP734 87 515 - -
Seca6g00963 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 514 - -
Seca6g00963 527 SUPERFAMILY Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 FunFam Cytochrome P450 734A1 34 522 - -
Seca6g00963 527 Pfam Cytochrome P450 87 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00963 527 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00963 Seca-Chr6 34366445 34372537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00963 7 523 Cytochrome P450 AT2G26710 70.286 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00963 K15639 - gmx:100786200 832.787