Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00957 ATGAGGGTGGAGGGAACTTTGCCCATAAATCCTTGGTATATTGGTGGTCCTGTCATCAAGGGATTTGGTCGTGGCTCGAAGGTACTGGGATCCCCACAGGCCTTAGATTCCTACCATTCTCAAGGCATAATGCATAGAGATGTCAAGCCCCATAATGTTATGATAGATCATGAATTACGGAAACTTCGCTTGATGATGCTTTTTTAG 207 0.4444 MRVEGTLPINPWYIGGPVIKGFGRGSKVLGSPQALDSYHSQGIMHRDVKPHNVMIDHELRKLRLMMLF. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00957 68 Gene3D Transferase(Phosphotransferase) domain 1 33 64 - -
Seca6g00957 68 PANTHER CASEIN KINASE II SUBUNIT ALPHA 33 65 IPR045216 GO:0004674|GO:0006468
Seca6g00957 68 ProSiteProfiles Protein kinase domain profile. 1 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g00957 68 SUPERFAMILY Protein kinase-like (PK-like) 33 60 IPR011009 -
Seca6g00957 68 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00957 Seca-Chr6 33984786 33988193 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Seca6g00957 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00957 - - sly:101254050 65.4698