Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00911 ATGGCTCCTCCATGGGTTCAAGAGCTCCATCTCCGTCACTTGAGTATTCCTGTGACTATTGATAAAATGTTTTCAGTTACACCATCGAGGCCCATTCCTGTTAAACCAGGTGACAGCTTATACCTTTCCAACCTCGATGACATGATTGGAGCACGTGTATTCACACCAACAGTGTACTTTTATCAACCAGACAACATGAGTTATTGCCAAAAGCCTGTGACTAAAACACTACGCGGTGCTCTCGCAGATGTTCTAGTGCCTTACTATCCTCTTTCTGGCAGGCTTAGAGAGACCAAGAATGGTAAACTTGAAGTGTTTTTTGGACCAGAACAAGGAGCACTCATGGTTGAGGCACGGTCTAATATTGCCTTATCTGAACTAGGAGACCTCACAGCTCCAAACCCAGCTTGGGAACCTTTGATCTTCAAATTTCCCAATGAAGAACAATACAAAGTCCTTGAAATGCCATTGGTCATTGCTCAGGTTACCCTATTCAGCTGTGGTGGCTTTAGCCTTGGTTTGAGGCTCTGCCATTGCATCTGTGATGGCCTAGGAGCTATGCAGTTCCTAGGTGCATGGGCTGCAACAGCAAAAACAGGGAAGCTGGTTACAGACCCTGAGCCCTGTTGGGACAGGGAAATGTTTAGGCCTCGTGATCCACCAGTGGTGAAATTTCCACACTTGGAGTTCATGAGAATTGATGAGGGCTCTAACCTCACAATGACACTCTGGCAAACCAAGCCTGTTCAAAAGTGTTACAGGATCAAGCGTGAATTCCAAAACTGCTTGAAATCCCTTGCTCAGCCGATTGATGCTGCAGGTTGCACCACTTTTGATGCCATGGCAGCTCATATTTGGAGATCATGGGTGAAAGCCCTTGATGTAAGACCATTAGATTACCAGCTTAGGCTAACATTTTCAGTCAATGCTCGGCAGAAGCTTAGAAACCCACCACTGAAAGAAGGGTTTTATGGCAATGTGGTATGTGTTGCATGCACAACAAGCACTGTTTCAGAGCTTGTGCATGGACAGCTCCCAGAGACTACCCGTTTGGTTCGTGAAGCCAGGCAGTGTGTCTCAGAAGAGTATTTGAGATCCACAGTGGATTATGTTGAAGTGGATAGGCCAAGGCAACTTGAGTTTGGAGGTAAACTAACAATAACTCAATGGACCAGATTCTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCTCTCTATGCTGGCCCTATAGATTTAACACCCACACCTCAAGTTTGTGTATTTCTACCGGAAGGGGAGGCTGATTGTAGTGGCTCTATGATAGTGTGCATATGCTTGCCTGAGTCTGCTGCTCAGAAGTTTACACAAGCCTTGTTGCTCGATTCAGTGTTGACATAA 1383 0.4584 MAPPWVQELHLRHLSIPVTIDKMFSVTPSRPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQPDNMSYCQKPVTKTLRGALADVLVPYYPLSGRLRETKNGKLEVFFGPEQGALMVEARSNIALSELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFSCGGFSLGLRLCHCICDGLGAMQFLGAWAATAKTGKLVTDPEPCWDREMFRPRDPPVVKFPHLEFMRIDEGSNLTMTLWQTKPVQKCYRIKREFQNCLKSLAQPIDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARQKLRNPPLKEGFYGNVVCVACTTSTVSELVHGQLPETTRLVREARQCVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSGSMIVCICLPESAAQKFTQALLLDSVLT. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00911 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 449 - -
Seca6g00911 460 Gene3D - 239 453 IPR023213 -
Seca6g00911 460 Gene3D - 15 232 IPR023213 -
Seca6g00911 460 Pfam Transferase family 17 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00911 Seca-Chr6 31142340 31143722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00911 30 454 Monolignol Biosynthesis Gene Families AT5G48930 30.963 1.46e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00911 K15400 - gmx:100802814 852.432