Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00885 ATGGAAAATAATGTGCAACACTGTAATGATATGGGAACTACAGAAGATAGTTTCGATGATGATGATTACACTTCAATGAATGATGTGGAACCGCCTATTGATTTTGCTGTAAATAGCGAAGCTGATTTTGCCAATTTTGACCCTGCAATGTTAAATGAGGAGAGTCTGTTGAAGTTTCATTTTGTTGATCTTGAAGTCGCATATGAATTCTATAATTGGTATGCCAGCATTAAGGGTTTTTCAGTGCGCAAAAGCAAGGTGCGAAAACAGAAAAATGATGAGATTGTGGAGAAGAATTTTCTTTGTCACAGGGAAGGTAAGCGAACAAAAAAGACCCTGTGA 342 0.3713 MENNVQHCNDMGTTEDSFDDDDYTSMNDVEPPIDFAVNSEADFANFDPAMLNEESLLKFHFVDLEVAYEFYNWYASIKGFSVRKSKVRKQKNDEIVEKNFLCHREGKRTKKTL. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00885 113 Pfam FAR1 DNA-binding domain 69 111 IPR004330 -
Seca6g00885 113 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 111 - -
Seca6g00885 113 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00885 Seca-Chr6 29915889 29916948 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00885 FAR1 4.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00885 - K17604 mtr:11441999 89.3521