Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00875 TCCAGGTCTGCAGTAGGCCGCACACAGCGGACAAGTGGCGCTCGGTGGGAGCCGCGTTTCGCGTCTCTGCGACCAGGAGGGGCTGCGGCGGAGCTGGTGGCTAGATCAAGACAAGAAGCCCCGCGGTGGTTGCGTGGCGGACGACGCGGCTGTGGCGATTCAAGGAGGAGACAGCGGCTGCAAGAACGACAGAGGATCATGGAACTTTACAATGTCCAGAGTTTCAACCAAAATGCTATCAGCACATCTCAGAGGTTTGAGGATGAGCAAAGGGGTAGTAGCCCTTTGGCTGCATGGTTAAATTCAACAGCAAGGACTCACTACTACCAAAGCTCAGCCTCAAGAATCAATTTGGACAACATCGGTGGTGGTGAAAACTTGAATAAAGGAGGGCCATCCAATGAAGCTGCAAGAATATCCAACTCTTCTATACAGGAGACTGAATTCAATAATGGCATTGACAATGACTCAGAATGGATTGAGAAGGATCAGCCTGGAGTGTTGATCACAATCAGGGTGCTGCCTGATGGAACAAAACAGATTCACCTTGTCAGGTTCAGGAGAAGCCATATTGGATCATTAAAAATTCCCGGGGAGAGAGCTGGGGAGAAAATGGATACTACAAGATTTGCAAGGGATGAAATATCTGTGGGGTGGATTCGATGGTTTCTACTGTCGCCGCTGTTCATACCGATACCACCACTCAGTAGGATGGATGCTAACCTTCCTTGA 732 0.5 SRSAVGRTQRTSGARWEPRFASLRPGGAAAELVARSRQEAPRWLRGGRRGCGDSRRRQRLQERQRIMELYNVQSFNQNAISTSQRFEDEQRGSSPLAAWLNSTARTHYYQSSASRINLDNIGGGENLNKGGPSNEAARISNSSIQETEFNNGIDNDSEWIEKDQPGVLITIRVLPDGTKQIHLVRFRRSHIGSLKIPGERAGEKMDTTRFARDEISVGWIRWFLLSPLFIPIPPLSRMDANLP. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00875 243 Pfam Transcription factor regulating root and shoot growth via Pin3 157 190 IPR013591 -
Seca6g00875 243 ProSiteProfiles BRX domain profile. 157 210 IPR013591 -
Seca6g00875 243 PANTHER PROTEIN BREVIS RADIX-LIKE 1 64 193 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00875 Seca-Chr6 29785016 29788478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00875 20 194 Major Intrinsic Protein MIP AT1G31880 32.258 3.10e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00875 - - vum:124826203 109.383