Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00821 ATGGAGTTCGTTTTGCAATCTTTTCAACCTTCAACCATTCTTTTTCTTCTCTTCTCACTGTCAACTTTTGTTGTCTTCTTACTTCGCCTGCGTAGAAAACTCCCATACCCACCAGGTCCAAAAGGGCTACCCATCATAGGGAACATGTTGATGATGGACCAACTAACCCACCATGGTCTAGCTCGACTCGCCAAACGTTACGGTGGGTTCTGCCATCTCAGAATGGGCACCCTCCACATTGTGGCCGTGTCGACCCCAGAAATGGCCCGTGAAGTCCTTCAGGCCCAAGACAACGTTTTTTCAAACCGGCCCGCCAACGTGGCGATCACCTACTTAACCTACGACCGAGCAGACATGGCCTTTGCAAATTATGGCCCGTTTTGGCGACAAATGCGTAAAATTTGTGTGATGAAGTTGTTCAGCCGAAAACGGGTTGAGTCGTGGGCTTCTGTACGAGAGGAGATGGAAGAAACGGTTAGAACCGTGGCAGGGAAAACCGGTTCACCGGTTAACTTGGGTGAGCTAGTTTTCTCTCTGACCAGGAACATCACCTTTAAGGCCGCGTTTGGGGCCAGCCTAAACAACGGGCAAGAGGAATTCATGAAAATCTTGCAAGAATTTTCAAAGCTTTTTGGAGCTTTCAACTTAGCAGATTTTTTTCCGTGGTTGGGTTGGTTTCATGCACAAGAGTTTAAGAAAAGAATGGCCAATGCACGAAAAGCACTTGATGTGTTTATTGATGAGATCATTGATGATCACGTGGCAAAGAGGAAGAACAACATGGAGAAGAAGAATAATGAGAACGAAGCAGAAGCTGACATGGTTGATGAACTTATGGAGTTCCTTAACGAAGGAGATGGTGATAGTAACCGTTCAGACAATTCACAATCGACAACACTGAAGCTTACTAGAGACAATATCAAAGCTCTTATTATGGATGTCATGTTTGGTGGAACTGAGACGGCAGCATCAGTGATAGAATGGACAATGGCAGAGCTCATGAAAAGCCCAATGGATCTTCAGAAGGTTCAACAAGAGCTCATGGATGTTGTGGGCTTGGATAGAAGATTCAGCGAATCTGATCTTGACAAATTGACTTATCTCAAATGCACTATCAAAGAAACATTAAGGCTCCACCCTCCAATTCCCCTTCTTCTCCATGAGACCGCAGAAGATAGTGTCGTTTCGGGCCACTTTATCCCAAAAGCAACACGGGTTTGGATCAATGCATGGGCCATTGGTCGTGACCAAAGTGCATGGGCTGAGCCCGAAACATTTAAGCCATCAAGGTTCTTGAATGATGGCATGCCAGATTTCAAAGGAAGCAACTTTGAATTCATTCCTTTTGGGTCAGGGAGAAGGTCATGCCCAGGGATGCAACTTGGGCTCTATGCTGTTGAAATGACTGTGGCTAATTTGCTTCATTGTTTCAAGTGGGAGTTACCAAATGGAATGGAGCCCAATGAGCTTGATATGAATGATGTGTTTGGCCTCATTGCTCCAAGGGCAGTTCAACTTGTTGCAGTACCCAGTTATCGTCTGAATTGTCCTCTCTAG 1557 0.4554 MEFVLQSFQPSTILFLLFSLSTFVVFLLRLRRKLPYPPGPKGLPIIGNMLMMDQLTHHGLARLAKRYGGFCHLRMGTLHIVAVSTPEMAREVLQAQDNVFSNRPANVAITYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRVESWASVREEMEETVRTVAGKTGSPVNLGELVFSLTRNITFKAAFGASLNNGQEEFMKILQEFSKLFGAFNLADFFPWLGWFHAQEFKKRMANARKALDVFIDEIIDDHVAKRKNNMEKKNNENEAEADMVDELMEFLNEGDGDSNRSDNSQSTTLKLTRDNIKALIMDVMFGGTETAASVIEWTMAELMKSPMDLQKVQQELMDVVGLDRRFSESDLDKLTYLKCTIKETLRLHPPIPLLLHETAEDSVVSGHFIPKATRVWINAWAIGRDQSAWAEPETFKPSRFLNDGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYAVEMTVANLLHCFKWELPNGMEPNELDMNDVFGLIAPRAVQLVAVPSYRLNCPL. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00821 518 Coils Coil 258 278 - -
Seca6g00821 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 Pfam Cytochrome P450 37 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Seca6g00821 518 CDD CYP71-like 66 506 - -
Seca6g00821 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 PANTHER CYTOCHROME P450 84A1-RELATED 9 518 - -
Seca6g00821 518 FunFam Cytochrome P450 84A1 29 512 - -
Seca6g00821 518 Gene3D Cytochrome P450 29 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00821 518 Coils Coil 228 248 - -
Seca6g00821 518 SUPERFAMILY Cytochrome P450 37 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00821 Seca-Chr6 28069790 28072516 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00821 10 518 Monolignol Biosynthesis Gene Families AT4G36220 64.833 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00821 K09755 - zju:107426594 728.398