Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g00798 | ATGGCTCCTTTCAGCGGCGATGAGACGGCACCGTTTTTTGGCTTTCTTGGAGCCGCAGCTGCCCTCGTCTTCTCCTGTATGGGAGCTGCCTATGGAACAGCAAAGAGTGGTGTTGGTGTGGCTTCGATGGGTGTGATGAGACCAGAGCTGGTGATGAAGTCTATTGTCCCTGTTGTTATGGCTGGAGTTTTGGGTATTTATGGCCTTATTATTGCTGTTATAATCAGTACTGGTATTAATCCCAAGGCCAAGTCTTATTATCTCTTTGATGGTTATGCACATCTCTCCTCTGGTCTTGCCTGTGGGCTGGCTGGGCTCTCTGCTGGCATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGGTATAATTCTTCTGCCTTAGTGTCTGATCTATGA | 396 | 0.4798 | MAPFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYNSSALVSDL. | 132 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g00798 | 131 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 29 | 53 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Seca6g00798 | 131 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 106 | 131 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Seca6g00798 | 131 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 55 | 79 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Seca6g00798 | 131 | NCBIfam | V-type ATPase subunit C | 12 | 120 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Seca6g00798 | 131 | SUPERFAMILY | F1F0 ATP synthase subunit C | 12 | 76 | IPR035921 | - | |
Seca6g00798 | 131 | FunFam | V-type proton ATPase proteolipid subunit | 10 | 130 | - | - | |
Seca6g00798 | 131 | SUPERFAMILY | F1F0 ATP synthase subunit C | 86 | 121 | IPR035921 | - | |
Seca6g00798 | 131 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 12 | 79 | - | - | |
Seca6g00798 | 131 | Gene3D | - | 10 | 128 | IPR035921 | - | |
Seca6g00798 | 131 | Pfam | ATP synthase subunit C | 16 | 75 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Seca6g00798 | 131 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 4 | 124 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g00798 | Seca-Chr6 | 27050373 | 27052251 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g00798 | 1 | 125 | Primary Pumps ATPases(2) | AT2G16510 | 96.000 | 9.24e-81 | 233 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g00798 | K02155 | - | gmx:100815182 | 218.394 |