Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00796 ATGTGCCGAGAGTTTGGCAGTGAAGAACAGGCATATGAATTCTATTCATTATATGCAAAACATAATGGGTTTGTGGTTAGGAAAGATGATATAACGAGGGATACTAGGGGGAATCTTATTATGCGTCAGTTTGTTTGCAATAGGGAGGGATTAAGAAACAAGAAGCATTTTATGAGGGTGGATAGGAAGAGAGACCATAGGCTACTTACTCGTACAAATTGTCAAGCTAAGCTTCGTATACACTACCATGAAAAAAGTTTAAAGTGTAAAGTAGTTTCATTTGAGCAGTCTCATAACCATGAGCTTACCCCATCAAGATTAGTGCACCTTCACCCTGCTTACCATCGATTATCAGATATAGATAAGGCGCAAGTTGATACTTTGCAAACATATGGTCTTAGAGGTTGTCACATTATGGGGTACCTAGTGGCTCAAAAGGGGGGTTATTGTCGTGTTGGCTTTATAAAGAAGGACATGTACAACTATCTAGACCGGAAAAATGAAGCAAAGGTTAAGAAAGGGGATGTACGTGCTGTGTTGAGTTACCTACAAGGCAAGGATGACAGTGACCCCCTTTTATATGGGAAGTATTCAACTGGATTTGATGGTAAATTGAAGCGTCTTTTTTGGGCAGATGGAGTTAGTAGATATGATTTTCAAGGTTTTGGTGATATCCTTGCATTTGACACCACATACAAGATGAACAAGTATAATTATCCAATTGTGATATTTTCTGGTTGCAATCATCATTCACAGACAATTATTTTTTATTGTGCGTTAGTCTCAGATGAAACAACTGAAACATATAAGTGGGTCTTAGAAGCTTTCTTGGATGCAATGGGTAATAAACAACCTATAAGTGTTGTCACAGATGGTAATAGTGCAATGAGGGAGGCTATAAAAGATGTTTTTCCATATTCATGCCATCGCTTATGTGCATGGAAATTACATAACAATGCATGTGACAATGTAAAAAATTCTTCCTTTTTGCAAGATTTCAAGATAGTAATGTACTCCAATTTCTCACCTGATGAATTTGAGGAGTATTGGAAGAAAATTGTGGCTGAACATAGTCTAGAGGGAAACAAAATGGGTGTCCAAAACATATGA 1110 0.3739 MCREFGSEEQAYEFYSLYAKHNGFVVRKDDITRDTRGNLIMRQFVCNREGLRNKKHFMRVDRKRDHRLLTRTNCQAKLRIHYHEKSLKCKVVSFEQSHNHELTPSRLVHLHPAYHRLSDIDKAQVDTLQTYGLRGCHIMGYLVAQKGGYCRVGFIKKDMYNYLDRKNEAKVKKGDVRAVLSYLQGKDDSDPLLYGKYSTGFDGKLKRLFWADGVSRYDFQGFGDILAFDTTYKMNKYNYPIVIFSGCNHHSQTIIFYCALVSDETTETYKWVLEAFLDAMGNKQPISVVTDGNSAMREAIKDVFPYSCHRLCAWKLHNNACDNVKNSSFLQDFKIVMYSNFSPDEFEEYWKKIVAEHSLEGNKMGVQNI. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00796 369 Pfam MULE transposase domain 225 319 IPR018289 -
Seca6g00796 369 PANTHER OS01G0519700 PROTEIN 4 363 - -
Seca6g00796 369 Pfam FAR1 DNA-binding domain 13 103 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00796 Seca-Chr6 26990658 26991767 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00796 MULE 3.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00796 - - ccaj:109792835 528.48