Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g00793 | ATGGGTGATAGTGAAGATGCTAATAATAATGACATGATGCAGAGGCTTCACTTGAAACAGATGGAACAATTGAGCATACCCCAATTCAATCAAATGCGAGCAAGGCATCATTTTCAACAGGGTTTGATTGAAGGTAACAACAACAACAACAATAACAAACGAGTTGGGATACCACCTTCACACCCTAACCAGATCCCACCCATTTCACCATATTCTCAGATCCCTGTTTCAAGGCCTCAAATGGCTTCTCCTACACCCTCACATTCTCGATCACTCTCACAACCTTCTTTTTTCTCCCTTGATTCTCTTCCCCCTTTAAGCCCTTCTCCTTTTCGTGACTCTTCTTCAACCTCCATCTCTGACCCTCCTGCTGCTGCTGACGTGTCCATGGAAGATCGTGATGTGAGTTCCCACTCTCTTTTGCCACCTTCATCTCCCTTTGCTAGAGCGTGTCGTGTTGGGGAGAGTTTACCTTTACCCCCTCCTCGCAAAGCTCATAGACGCTCCAACAGTGATATCCCATTTGGGTTTTCAACCGTTTTGCAATCTTCGCCACCACTCATTCCTCTTAGGGGAAGAGAAGTAGCTAAACCTGGTAAGTTGGTCAAAAAGGAAACGAATTGGGAAAAGGGTGTTACTGTTGTTGACCATAATGTAGAGGGTACTGGGGAGAAGAAATCCCCTGAAGGGGAAGTTGTTGATGATCTTTTCTCTGCTTATATGAATTTGGATAGCTTTGATGCCTTGAACTCTTTGGGGACTGATGACAAAAACAACAGTGGTGAAAATCGTGATGATTTGGATAGTAGAGCTAGTGGAACCAAGACTAATGGAGGTGATAGCAGTGATAATGAAGCTGAAAGTAGTGTTAATGAGAGTGGGGATGGTGTGCAAAGGCAACAACAAGGAATGAATAATAATAGTAATAGTTTTGGTGGTGACAAGAGGGAAGGGGTGAAGAGGAGTGCTGGTGGTGATATTGCACCTACCACTAGACACTATAGGAGTGTGTCCATGGATAGTTTCATTGGGAAGTTGAATTTCAATGATGAGTCACCTAAGCTACCACCTTCACCTGGGTTGATTTCACCAGGCAGTAATAATGCAATTGATGGGAATTCATCAGCTTTCAGCTTGGAGTTTGGGAATGGGGAATTCAGTGGCCCTGAATTGAAGAAAATTATGGCTAATGAAAAACTTGCTGAGATTGCTTTGACAGATCCAAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCAGCTGCACGTTCCAAAGAACGGAAGATGCGTTACATTTCAGAACTAGAACACAAGGTTCAGACTTTACAGACAGAAGCCACAACACTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGTTGGACTCACCAACCAGAACAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAACGAGGCACTTACTGCTGAGGTTCAAAGACTGAAGCTTGCTACAGCTGAGCTGAATGGGGAATCACAACCTTCTAGCTGCTTGATTCCACAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAACAGCATCAGCATCAGCATCCTCCAACTACATCCCAACAAAACATTCATCTTCAACAGCAACAGCAGCAGAATGGTAATGGTAATGCCAACTCTAACCCCGACTTAAAACAATAG | 1701 | 0.4397 | MGDSEDANNNDMMQRLHLKQMEQLSIPQFNQMRARHHFQQGLIEGNNNNNNNKRVGIPPSHPNQIPPISPYSQIPVSRPQMASPTPSHSRSLSQPSFFSLDSLPPLSPSPFRDSSSTSISDPPAAADVSMEDRDVSSHSLLPPSSPFARACRVGESLPLPPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGREVAKPGKLVKKETNWEKGVTVVDHNVEGTGEKKSPEGEVVDDLFSAYMNLDSFDALNSLGTDDKNNSGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGVQRQQQGMNNNSNSFGGDKREGVKRSAGGDIAPTTRHYRSVSMDSFIGKLNFNDESPKLPPSPGLISPGSNNAIDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGESQPSSCLIPQHSVNPLMFQQQQHQHQHPPTTSQQNIHLQQQQQQNGNGNANSNPDLKQ. | 567 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g00793 | 566 | FunFam | probable transcription factor PosF21 | 408 | 461 | - | - | |
Seca6g00793 | 566 | MobiDBLite | consensus disorder prediction | 74 | 123 | - | - | |
Seca6g00793 | 566 | MobiDBLite | consensus disorder prediction | 42 | 58 | - | - | |
Seca6g00793 | 566 | Coils | Coil | 425 | 459 | - | - | |
Seca6g00793 | 566 | MobiDBLite | consensus disorder prediction | 526 | 566 | - | - | |
Seca6g00793 | 566 | MobiDBLite | consensus disorder prediction | 42 | 147 | - | - | |
Seca6g00793 | 566 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 407 | 470 | IPR004827 | GO:0003700|GO:0006355 | |
Seca6g00793 | 566 | Pfam | bZIP transcription factor | 409 | 463 | IPR004827 | GO:0003700|GO:0006355 | |
Seca6g00793 | 566 | MobiDBLite | consensus disorder prediction | 272 | 313 | - | - | |
Seca6g00793 | 566 | CDD | bZIP_plant_RF2 | 410 | 459 | IPR044759 | GO:0003700|GO:0006355 | |
Seca6g00793 | 566 | Gene3D | - | 408 | 460 | - | - | |
Seca6g00793 | 566 | Coils | Coil | 488 | 508 | - | - | |
Seca6g00793 | 566 | MobiDBLite | consensus disorder prediction | 253 | 332 | - | - | |
Seca6g00793 | 566 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 101 | 558 | - | - | |
Seca6g00793 | 566 | SMART | brlzneu | 405 | 469 | IPR004827 | GO:0003700|GO:0006355 | |
Seca6g00793 | 566 | SUPERFAMILY | Leucine zipper domain | 409 | 460 | IPR046347 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g00793 | Seca-Chr6 | 26940578 | 26945325 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g00793 | 1 | 528 | bZIP Transcription Factor Family | AT4G38900 | 57.597 | 6.02e-174 | 501 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Seca6g00793 | bZIP_1 | 7.5e-09 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g00793 | - | - | gmx:778145 | 688.337 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca6g00793 | 6 | 26940578 | 26945325 | Seca6g00793 | 6 | 26940578 | 26945325 | ECH |