Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00774 ATGGCTGATGACACCCGTCCCATTGATCATAACTGCCCTTGTATGGTTTGCAAGAACTACACTAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCTATGGGGTCTCAGCTTGTGTCATATCATAATTTATATTACATAATGCAGCTTAGTAGGGATCTGCACTCTTCAATAATTGAAGGAAGGTTCCCAAACAGCAACAACTTTTGGTGTATTGTCCCTCATGTAATCATCAAAGCCAAGCTTGCTCATAGCCCACAGGACATCCTCTGCTCCATGTTGTTGACACCAGGAGGAAGTGAACCATGCACCAACGGTTTAATTTCAATTTTGGCTATCTTAGTTATTCATATTCCTGCTCGTTTTCGGAATTTCAACATTATTGACTCTTCACGCTTTGGTAATCGTCTTTGTTCTCCCTTCTTGCTTTCCTTTTATTGA 441 0.4104 MADDTRPIDHNCPCMVCKNYTRAYIHCLVTKDAMGSQLVSYHNLYYIMQLSRDLHSSIIEGRFPNSNNFWCIVPHVIIKAKLAHSPQDILCSMLLTPGGSEPCTNGLISILAILVIHIPARFRNFNIIDSSRFGNRLCSPFLLSFY. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00774 146 NCBIfam tRNA-guanine transglycosylase 3 64 IPR002616 GO:0006400|GO:0016763
Seca6g00774 146 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 1 65 - -
Seca6g00774 146 Pfam Queuine tRNA-ribosyltransferase 2 65 IPR002616 GO:0006400|GO:0016763
Seca6g00774 146 Gene3D - 1 71 IPR036511 GO:0006400|GO:0016763
Seca6g00774 146 SUPERFAMILY tRNA-guanine transglycosylase 2 67 IPR036511 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00774 Seca-Chr6 26197219 26199297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00774 103 133 Core Cell Cycle Gene Families AT3G12280 74.194 6.01e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00774 K00777 - cpap:110816734 131.724